Gene Pnuc_0499 details

Gene Information

• Locus tag: Pnuc_0499
• Symbol: cmk
• ID: 5053991
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1
• Kingdom: Bacteria
• Replicon accession: NC_009379
• Strand: +
• Start bp: 491156
• End bp: 491818
• Gene Length: 663 bp
• Protein Length: 220 aa
• Translation table: 11
• GC content: 46%
• IMG OID: 640470653
• Product: cytidylate kinase
• Protein accession: YP_001155283
• Protein GI: 145588686
• COG category: [F] Nucleotide transport and metabolism
• COG ID: [COG0283] Cytidylate kinase
• TIGRFAM ID: [TIGR00017] cytidylate kinase

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 0.0933266
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCGCTA TTCCAGTCAT TGCGATTGAT GGACCGACTG CTTCAGGCAA AGGAACGGTT 
GCTTCATTAG TTGCTGAAAA GCTCGGCTTT CATTACTTAG ATAGCGGCGC GCTTTATCGC 
TTGGTGGCCT TAGCCAGCGA AAAGCACGGA ATTGACGTGA AAAATGGCCC TGAATTAGGC 
CTTTTAGTTC CTAAGTTATT GATTTCATTC AAAAATAGTC AGATTTTCCT CGATGACGAC 
GAAGTAACAG ATGCAATTCG CACTGAAAGC ATAGGTTTAA GAGCATCAGC TTTAGCGGTT 
CATCCAGAGG TCAGATCTGC TTTAGTGGGT CTACAACGCA GTTTTCGCCA ATTTCCTGGT 
CTCGTGGCTG ACGGAAGGGA TATGGCCAGC GTCATATTCC CAGATGCAGT TTTAAAGGTT 
TTCTTGACCG CAACAGCTGC CGCCAGGGCT GAGCGTCGCT ATAAGCAATT GATAGCTAAG 
GGAATTTCTG CTAAACTTTC TGACTTACTG CAGGATTTGC AGGAGCGCGA TGCCAGAGAC 
AGTAGTCGAG GTACCGCCCC CTTGTTAGTC GCAGATGGTG CAAAAGTGCT TGAAACATCA 
GATTTGTCGA TAGATCAAGC AGTTAAGACA GTTTTGGATT GGTATCAGTC TGCGATTGCC 
TAA 

 

Protein sequence

MSAIPVIAID GPTASGKGTV ASLVAEKLGF HYLDSGALYR LVALASEKHG IDVKNGPELG 
LLVPKLLISF KNSQIFLDDD EVTDAIRTES IGLRASALAV HPEVRSALVG LQRSFRQFPG 
LVADGRDMAS VIFPDAVLKV FLTATAAARA ERRYKQLIAK GISAKLSDLL QDLQERDARD 
SSRGTAPLLV ADGAKVLETS DLSIDQAVKT VLDWYQSAIA