Gene Pnuc_0456 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_0456 
Symbol 
ID5053536 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand+ 
Start bp448269 
End bp449207 
Gene Length939 bp 
Protein Length312 aa 
Translation table11 
GC content44% 
IMG OID640470609 
Productcytochrome c oxidase, cbb3-type, subunit III 
Protein accessionYP_001155240 
Protein GI145588643 
COG category[C] Energy production and conversion 
COG ID[COG2010] Cytochrome c, mono- and diheme variants 
TIGRFAM ID[TIGR00782] cytochrome c oxidase, cbb3-type, subunit III 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.844005 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTGACT TTCTTGGCGC CGGTTGGAGC ACCTATATCG CCTTAGTAAC ATTAGTCGGT 
ATTTTTTGGT GCATATGGTT ATTGTTTTCT CAACGAAAGA CTAAAGTTAC GCTGAAGCCA 
GATGGCCAGG TCGCTGATAC TGGTCATGTT TGGGATGGCG ATTTACGTGA ATTAAATAAT 
CCATTGCCAC GGTGGTGGAT GTGGATGTTC TTGATCTCTT GTATTTTTGC CTTAGTCTAC 
CTCGTGTTGT ATCCAGGCTT AGGCTCTTTC CCTGGAATCT TGGGTTACAG CACTGATGGT 
GCTTTGATGA AATCCATGAC TACCGCTAAC GACGATTTGA AGCCGGTCTA CGCTAAATAT 
GTGAAGATGG ATATTGAGCA AATTGCTGCT GATCCTCAGG CTCGTGAGAT GGGTCAACGT 
CTTTTCTTGA ATTCTTGTGC ACAGTGCCAT GGTTCAGATG CGGGTGGTGC TAAAGGCTTC 
CCTAATTTGA CTGATGGCGA CTGGCTCTAT GGCGGTTCTC CAGAAAATAT CAAAGCAAGC 
ATTACTAATG GTCGTGGTGG TGTAATGCCT CCATTTCCAC AATTGGATAG CAAACAAATT 
GTTGACGTTG CCAACTATGT ACGTTCTTTA TCTGGTTTAC CAGCCGATGA TTTGAAGGCA 
GCTCGTGGAG CCGAAGTGTT TAAGGCTAAC TGCGTCGCTT GTCATGGCCC CGATGGCAAA 
GGCAATATTG CTATAGGCGC ACCAAACCTG ACAGATAAAA CTTGGTTGTA CGGTAGCTCT 
GAAGCGACCA TTGTTGAAAC AGTCACTAAG GGTCGTATGG CAATGATGCC TGCTCAAGAT 
AAAGTATTAA GCCCTGAGAA GATTCAGTTA TTAACTGCAT ATGTATGGGG TTTATCAAAC 
AATAAACAGC CAGCAAATAC TTCAGCAGAT ACAAAGTAA
 
Protein sequence
MSDFLGAGWS TYIALVTLVG IFWCIWLLFS QRKTKVTLKP DGQVADTGHV WDGDLRELNN 
PLPRWWMWMF LISCIFALVY LVLYPGLGSF PGILGYSTDG ALMKSMTTAN DDLKPVYAKY 
VKMDIEQIAA DPQAREMGQR LFLNSCAQCH GSDAGGAKGF PNLTDGDWLY GGSPENIKAS 
ITNGRGGVMP PFPQLDSKQI VDVANYVRSL SGLPADDLKA ARGAEVFKAN CVACHGPDGK 
GNIAIGAPNL TDKTWLYGSS EATIVETVTK GRMAMMPAQD KVLSPEKIQL LTAYVWGLSN 
NKQPANTSAD TK