Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnuc_0447 |
Symbol | |
ID | 5053405 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
Kingdom | Bacteria |
Replicon accession | NC_009379 |
Strand | + |
Start bp | 437468 |
End bp | 440071 |
Gene Length | 2604 bp |
Protein Length | 867 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640470600 |
Product | ATPase |
Protein accession | YP_001155231 |
Protein GI | 145588634 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
TIGRFAM ID | [TIGR03346] ATP-dependent chaperone ClpB |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.000000333741 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGAATAG ATAAGTTAAC AACCAAATTT CAAGAGGCTC TTAGTGAAGC CCAAAGTATC GCTTTAGCCA AAGACAACCA ATATATTGAG CCCGCCCATC TTCTGTTAGC GATGCTTCGT GACTCTGATG GTGGGGCAAA AAGTTTGCTC ACGCGCGCTG GAGTCAATGT GCTAGGCCTT GAAAAAGGTG TGGAAAAGCT GATTGGTAAT TTGCCAGAAG TGCAGGGCAC CAGCGGAGAG GTTCAAGTTG GGCGTGATTT AAGTAATTGG CTCAACTTAT GCGAGAAAGA AGCAAACAAG AAGAATGATC AATTCATTGC TGGCGAGTTA TTTTTGCTAG TAGTGGCTGA TGACAAGGGT GAGCTCGGTA AAGTGGCTCG CGAGAATGGT TTAAATCGTA AATCGTTAGA AGCGGCTATT GATTTAGTGC GCGGAGGAGA GTCAGTGAAT AGTGCAGATG CTGAAGGTCA ACGGGAAGCT TTAAAAAAAT ATACGGTCGA TTTAACGGAG CGTGCGCGCG CGGGTAAATT GGATCCAGTG ATTGGGCGTG ATGATGAAAT TCGTCGCACC ATTCAGATTT TGCAACGTCG CGGTAAAAAC AATCCAGTGT TGATTGGCGA GCCAGGGGTC GGTAAGACTG CCATTGTTGA AGGCTTGGCG CAACGCATTG TGAATGGCGA GGTGCCTGAG ACCCTTAAAA ATAAACGTGT ACTGGTTCTG GATATGGCCT TGTTATTGGC TGGTGCCAAG TATCGTGGTG AATTTGAGGA GCGCCTTAAG GCGGTTCTGA GTGATGTTGC TAAGGATGAA GGTCAAACCA TCATTTTTAT CGATGAGATC CACACCATGG TTGGAGCTGG TAAGGGCGAT GGCGCTATGG ATGCTGGCAA TATGCTTAAG CCTGCCTTGG CACGTGGTGA GTTGCATTGT ATTGGCGCAA CTACCTTGGA TGAGTATCGT AAGTACATTG AAAAAGATCC CGCACTTGAG CGTCGCTTCC AAAAAGTCAT GGTAGAGGAG CCGAGTGTGG AGGCGACTAT TGCCATCTTG CGTGGCTTAC AAGAGCGCTA TGAGCTTCAT CACGGGATAG AAATTACTGA TCCAGCTATC GTGGCGGCAG CTGAGTTGTC GCATCGCTAC ATTACCGATC GTTTCTTACC AGATAAGGCG ATTGATTTAA TTGATGAGGC GGGTTCACGC ATTCGGATGG AGATCGACTC TAAGCCAGAG GTGATGGATA AGCTAGAGCG CCGTCTGATA CAGCTCAAGA TTGAGCGCGA AGCCGTTAAG AAGGAAAAAG ATGAGGCTTC GCAAAAGCGT CTGGGCTTAA TCGAGGATGA AATTAAACGT CTTGGTGCCG AGTATGCGGA CTTAGAGGAA ATCTGGAAAG CAGAGAAGGG TGCTGTATTA GGCGCTGCCA ATCTGAAAGA AGAAATTGAA AAAATCCGTG CTGACATTGT GAAGTTACAG CGCGAAGGCA AGCTTGAGCA GGTTGCTGAA TTGCAATACA GCAAACTTCC TGAGTTAGAG GCTAAACTCA AATCTGCTGC GGCTGCTGAA GCCAAGGGTG ATAAAAATGG CGTAGTGAAG AATAAATTGC TGCGCACTCA AGTTGGTGCT GAAGAGATTG CCGAGGTGGT TTCTCGTGCT ACTGGTATTC CGGTTTCTAA GATGATGCAG GGCGAGCGTG ACAAGCTTCT CAAAATGGAA GAGTTACTGC ACAAGCGCGT TGTTGGTCAG GAAGAAGCCA TTCGTGCAGT GTCAGATGCG ATTCGTCGCT CCCGTGCTGG CTTAGCTGAA GAGAATCGTC CGTATGGATC CTTCTTGTTC CTTGGGCCCA CAGGTGTTGG TAAGACAGAG CTTTGCAAAG CTTTAGCAGG CTTCTTGTTT GACAGTGAAG ATCATCTGAT CCGTATCGAC ATGAGTGAGT TCATGGAGAA ACATAGCGTT GCCCGTTTGA TTGGCGCCCC TCCAGGTTAT GTTGGTTACG AAGAGGGTGG ATATTTAACT GAACAAGTTC GTCGTCATCC ATATAGCGTC ATCTTGTTTG ATGAAATTGA AAAAGCACAT CCAGATGTCT TTAACGTGCT CTTGCAGGTT CTAGATGATG GTCGCTTAAC CGATGGTCAA GGCCGCACGG TTGACTTCAA AAATACTGTG ATTGTGATGA CCAGTAATAT TGGTTCGCAT CTAATCCAAT CTATGGTTGA TAAGAAGCAG GCTGAAATTA AGGAAGCGGT ATTTGAGGAA TTGAAGAACC ACTTCCGTCC AGAGTTCTTG AACCGGATTG ATGAAATTGT TGTCTTCCAC GGCTTGGATA AAGGCAATAT TGCCAATATT GCGAAAATAC TCCTCAAAAA CTTGTCAGAT CGTCTGGCTA AGGTCGATAT GCAGCTTGAG GTGAGTGATG CTGCCTTAAG TAAGATTGCC GAGGTGGGCT TTGATCCTGT ATTTGGGGCA AGACCACTCA AGCGTGCTAT CCAGCAGCAT ATTGAAAACC CCGTTTCCAA GATGATTCTG GAAGGTACTT TTGGGCCTAA AGATACAGTG CCGGTAGATG TGGATAACAA AGGCGACTTC AGTTTTACTC GCCAAGTTCA TTAA
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Protein sequence | MRIDKLTTKF QEALSEAQSI ALAKDNQYIE PAHLLLAMLR DSDGGAKSLL TRAGVNVLGL EKGVEKLIGN LPEVQGTSGE VQVGRDLSNW LNLCEKEANK KNDQFIAGEL FLLVVADDKG ELGKVARENG LNRKSLEAAI DLVRGGESVN SADAEGQREA LKKYTVDLTE RARAGKLDPV IGRDDEIRRT IQILQRRGKN NPVLIGEPGV GKTAIVEGLA QRIVNGEVPE TLKNKRVLVL DMALLLAGAK YRGEFEERLK AVLSDVAKDE GQTIIFIDEI HTMVGAGKGD GAMDAGNMLK PALARGELHC IGATTLDEYR KYIEKDPALE RRFQKVMVEE PSVEATIAIL RGLQERYELH HGIEITDPAI VAAAELSHRY ITDRFLPDKA IDLIDEAGSR IRMEIDSKPE VMDKLERRLI QLKIEREAVK KEKDEASQKR LGLIEDEIKR LGAEYADLEE IWKAEKGAVL GAANLKEEIE KIRADIVKLQ REGKLEQVAE LQYSKLPELE AKLKSAAAAE AKGDKNGVVK NKLLRTQVGA EEIAEVVSRA TGIPVSKMMQ GERDKLLKME ELLHKRVVGQ EEAIRAVSDA IRRSRAGLAE ENRPYGSFLF LGPTGVGKTE LCKALAGFLF DSEDHLIRID MSEFMEKHSV ARLIGAPPGY VGYEEGGYLT EQVRRHPYSV ILFDEIEKAH PDVFNVLLQV LDDGRLTDGQ GRTVDFKNTV IVMTSNIGSH LIQSMVDKKQ AEIKEAVFEE LKNHFRPEFL NRIDEIVVFH GLDKGNIANI AKILLKNLSD RLAKVDMQLE VSDAALSKIA EVGFDPVFGA RPLKRAIQQH IENPVSKMIL EGTFGPKDTV PVDVDNKGDF SFTRQVH
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