| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_0427 |
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| Symbol | |
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| ID | 5052398 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | - |
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| Start bp | 416011 |
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| End bp | 416544 |
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| Gene Length | 534 bp |
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| Protein Length | 177 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640470580 |
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| Product | NLP/P60 protein |
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| Protein accession | YP_001155211 |
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| Protein GI | 145588614 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0791] Cell wall-associated hydrolases (invasion-associated proteins) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.00285469 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGCCGA CGCACTTTAA GAAAGCCCTC TCATGCCGCA CTCTCATTGG GTGCGGCATT
TTTATTTGCA TAATCCTGAC TCTGTCGGGA TGTAGCATCT TTAGCTCAAA GTCCAACTCC
TCAAGAGTGG CTCAATTCAA ACAAGATACG AGCGTTGGAA CTGAAGATAT CTCTATTGCA
GCAGTCGGTT TGGTGGACGT ACCCTATCGT TATGGCGGCA ATACCCCTAA GGGTGGTTTT
GATTGCAGCG GCCTGATTGT TTATGTATAC AACAAGGCAG CTGGCATTAA ATTACCGCGC
ACCATTCAAC TGATGAGTAC TCAGGGTCGC AGTGTTGAAA ACCAACCACC AGCACCGGGT
GACCTTGTGT TCTTCAATAC CACGGGCGAG AAATACTCTC ATGCTGGCAT CTATGTTGGT
CAAGGAAGAT TTGTACATGC GCCAAGCGCA GGTGGTACCG TGCGCCTAGA CCATATAACG
ACACCCTACT GGGCTGCTAA ATTTACTGAA GCACGACGCA TTACATCGCA ATAA
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| Protein sequence | MLPTHFKKAL SCRTLIGCGI FICIILTLSG CSIFSSKSNS SRVAQFKQDT SVGTEDISIA
AVGLVDVPYR YGGNTPKGGF DCSGLIVYVY NKAAGIKLPR TIQLMSTQGR SVENQPPAPG
DLVFFNTTGE KYSHAGIYVG QGRFVHAPSA GGTVRLDHIT TPYWAAKFTE ARRITSQ
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