Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnuc_0426 |
Symbol | |
ID | 5052718 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
Kingdom | Bacteria |
Replicon accession | NC_009379 |
Strand | - |
Start bp | 415164 |
End bp | 415985 |
Gene Length | 822 bp |
Protein Length | 273 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 640470579 |
Product | MscS mechanosensitive ion channel |
Protein accession | YP_001155210 |
Protein GI | 145588613 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0668] Small-conductance mechanosensitive channel |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.000444789 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGATA TTGAGTTTGA TCGGATCCAG GATCTAGTGA TAAATGCAGC AACAGATGTG GGTCTAAAAA TATTGGCTGC ACTTGCTTTT TGGATCATAG GCCGATGGCT GATTGGAGTT GCCCTACGTA TTACAAAGTC TGCACTTGGG CACCAAAAAA TAGACCATAC TATTTTGCGG TATCTGAATT CGGCCCTTTC AATAACGCTC AATATTCTTC TTGTGATCGG AATACTGGGT TTCTTTGGCA TTCAAACTAC TAGCTTTGCA GCGCTGATTG CTACTGCTGG CGTTGCCATT GGCGCGTCAT GGGCTGGTTT GCTGTCGAAT TTTGCAGCTG GAGTTTTTAT TATTGCCTTA CGTCCATTCA AAGTGGGCGA TGGCGTTACC ATTTGCGGTA TCACTGGAAC AGTAAGAGAG ATTGGTCTTT TTTCCTCCAC TATCAGCACG CCTGATAACG TCATTACCTT AATTGGAAAT AACAAAATCT TGGGTGACAC TATTCAAAAC TATAGTGATA CGCCTTATCG CCGGGTAGAT TTAAAGTGTC AGCTGTCTGC TAGCGCAGAT AGAGAAGCGG CCATGAAGCT ACTGCGTGAA AAGATTTCCA CAATTCCAAA CGTACTCCAA AATCCACCAG TTGAAGTCAA TATCCTGGAA TTTAATCTAG TAGGAGCAGT ACTAGCAGTA CGCCCTTACT GCAGCAATAG TAACTACTGG CAAGTATATT TTGAAACTAA TCGTGTAATG AGCGCTGCTC TGGAAGAGGC TAATTTTCCT ACTCCAGTAG CGTCACAACA TATGATTATG AAACAGGATT AA
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Protein sequence | MKDIEFDRIQ DLVINAATDV GLKILAALAF WIIGRWLIGV ALRITKSALG HQKIDHTILR YLNSALSITL NILLVIGILG FFGIQTTSFA ALIATAGVAI GASWAGLLSN FAAGVFIIAL RPFKVGDGVT ICGITGTVRE IGLFSSTIST PDNVITLIGN NKILGDTIQN YSDTPYRRVD LKCQLSASAD REAAMKLLRE KISTIPNVLQ NPPVEVNILE FNLVGAVLAV RPYCSNSNYW QVYFETNRVM SAALEEANFP TPVASQHMIM KQD
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