Gene Pnuc_0413 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_0413 
Symbol 
ID5052777 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand- 
Start bp403561 
End bp404121 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content44% 
IMG OID640470564 
Productelongation factor P 
Protein accessionYP_001155197 
Protein GI145588600 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0231] Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) 
TIGRFAM ID[TIGR00038] translation elongation factor P 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.154549 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAACAG CACAAGAACT CCGCGTTGGT AACGTAGTAA TGATCGGCAC TGATGCCATG 
GTCGTTTTAA AAGCAGAATA CAGCCGCTCC GGCCGCAACT CATCCGTTGT GAAAATGAAA 
TTTAAGAATT TGTTAACTGG CGCACCGAAC GAAGGTGTTT TCAAAGCTGA TGACAAATTT 
GATGTTGTGA TTCTCGACAA AAAAGAATGC ACCTACTCTT ACTTTGCAGA TCCAATGTAT 
GTATTCATGG ATACTGAATA CAACCAGTAT GAAGTTGAGG CTGAGTTCAT GGGTGATGCC 
TTGAACTACC TCGAAGAAAG CATGCCATGC GAAGTAGTGT TCTACGAAGG TAAAGCACTT 
TCAGTAGCAA TGCCTAACTC ACTCGTTCGC GAAATCATTT ACACAGAGCC AGCAGTTAAA 
GGCGACACCA GCTCAGGCAA GGTATTAAAG AACGCCAAAT TGGCAACTGG CTATGAACTG 
CAAGTTCCAT TGTTCTGCAA CACTGGTGAC AAGATTGAAA TCGATACTCG CACAGGTGAG 
TACCGCAGCC GCGCTAACTA A
 
Protein sequence
MKTAQELRVG NVVMIGTDAM VVLKAEYSRS GRNSSVVKMK FKNLLTGAPN EGVFKADDKF 
DVVILDKKEC TYSYFADPMY VFMDTEYNQY EVEAEFMGDA LNYLEESMPC EVVFYEGKAL 
SVAMPNSLVR EIIYTEPAVK GDTSSGKVLK NAKLATGYEL QVPLFCNTGD KIEIDTRTGE 
YRSRAN