| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_0408 |
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| Symbol | recO |
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| ID | 5053732 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | + |
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| Start bp | 399718 |
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| End bp | 400452 |
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| Gene Length | 735 bp |
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| Protein Length | 244 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640470559 |
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| Product | DNA repair protein RecO |
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| Protein accession | YP_001155192 |
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| Protein GI | 145588595 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1381] Recombinational DNA repair protein (RecF pathway) |
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| TIGRFAM ID | [TIGR00613] DNA repair protein RecO |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCCTCGA TTCGTGTTGC TGACGAACCT GCTTTTGTAT TGCACAGCAT CCCCTATAAA
GAGACTAGCT TAATCCTGGA TGTCTTTACA CGGCAGCATG GCCGCATGGC CTTAATTGCC
AAGGGCGCTA AACGTCCCCA TTCTGTCTTA CGACCAGTAT TACAGCGGTT TCAACCGTTA
TTAGTTTCAT GGAGTGGTAA ATCAGAATTA CGTACTCTGA CTAAATCCGA ATGGGTAGGT
GGCATGCCTT CTCTAGTCGG CGATGCTTTG CTCTGTGGGT TTTATCTCAA TGAGCTATTG
GTCAAGTTTT TGGCTCGAGA AGATGATTAC GAAAGGCTTT ACGATCGTTA CTCAGAAACG
ATTAATGCTT TGTCTAATCT CGAGTTTGAA TCTAAAGGTT TAGAGGAAAT ATTACGACCT
TTTGAACTCT CTTTATTGCA AGAGACAGGG TATGCCGCTG CATTAGATCG CTGTGTTGAA
ACAAACGATT CTCCTGTTTT TGAGGCCCTC TATGTTTACC AACCTGAGCG TGGTGTGCGC
CCAATACAGG TTGACGACCC CGGTCATTGG CCGGTTTTGC GGGGGAAGTC GCTCTTGGCG
ATTGCTGCAG GAGATTTTTC TGATCCAGAA ACTCTGTCTG AGAGTAAGCA ACTCATGCGG
TTTCTATTGG GACTGCACTT GCAGGATCAA GTCTTAACCA CGCGGCAAAT TTTGATTGAT
TTAAAGAAAA TCTAG
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| Protein sequence | MASIRVADEP AFVLHSIPYK ETSLILDVFT RQHGRMALIA KGAKRPHSVL RPVLQRFQPL
LVSWSGKSEL RTLTKSEWVG GMPSLVGDAL LCGFYLNELL VKFLAREDDY ERLYDRYSET
INALSNLEFE SKGLEEILRP FELSLLQETG YAAALDRCVE TNDSPVFEAL YVYQPERGVR
PIQVDDPGHW PVLRGKSLLA IAAGDFSDPE TLSESKQLMR FLLGLHLQDQ VLTTRQILID
LKKI
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