Gene Pnuc_0406 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_0406 
Symbolrnc 
ID5053042 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand
Start bp397982 
End bp398773 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content47% 
IMG OID640470557 
Productribonuclease III 
Protein accessionYP_001155190 
Protein GI145588593 
COG category[K] Transcription 
COG ID[COG0571] dsRNA-specific ribonuclease 
TIGRFAM ID[TIGR02191] ribonuclease III, bacterial 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.832098 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACGCGC GCGCCGTCAT TGAAACCGCA ACGCTTCAAG AGCGCCTTGG CTACGTCTTT 
AAAAAGACTG AGCTTCTTAA TCAAGCCTTA ACGCATCGCA GCCACAGCAA GAAGAATAAC
GAACGCCTGG AGTTTTTGGG CGATTCTATT TTGAACTGCG TGGTTGCAGA TCTCTTGTAT
GAGCGCTACT CTGATTTAGA CGAGGGTGAC CTTTCTCGTG TCCGCGCTAA TTTGGTGAAG
CAACAGGCTT TATATGAAAT AGCGCAGACA CTTTTATTGT CTGACCATCT TCGCCTTGGT
GAAGGTGAGT TAAAAAGTGG GGGATTCCGT CGCCCATCGA TTCTGGCGGA TACTTTAGAG
GCGGTAACGG GCGCAATCTT TTTGGATGGC GGTTTTGATG CTGCAAAAGA TTGCTTGCGT
AAGCTGTACT CGGTGATTTT GGCTCAAGTT GATCCCAAGA CTTTAGGTAA AGATGACAAA
ACACTTTTAC AAGAGTGTTT GCAGGGCTAC CAACTGCCTT TGCCAACTTA TAACGTCACA
GGAACAACTG GTGCTGCACA TAATCAACAG TTTGAGGTTG AGTGCTTAAT TCCAAGTCTG
AAGGTTTCTG TCAAAGGTGA TGGTGCATCA CGCCGCGCTG CCGAACAATC GGCCGCTAAG
ATCGCTTTAG TTGCGGTGCT CAAGGCCCTG CCTCAAGAAT CTCGTAAACC CAAGAAAACT
CGGTCGGCTA AGAAGAAGGC GGCCAAAAAA GAAGTGACCG AAGAGCAGTT AAATCTTAAG
CTGAAGGGCT AA
 
Protein sequence
MNARAVIETA TLQERLGYVF KKTELLNQAL THRSHSKKNN ERLEFLGDSI LNCVVADLLY 
ERYSDLDEGD LSRVRANLVK QQALYEIAQT LLLSDHLRLG EGELKSGGFR RPSILADTLE
AVTGAIFLDG GFDAAKDCLR KLYSVILAQV DPKTLGKDDK TLLQECLQGY QLPLPTYNVT
GTTGAAHNQQ FEVECLIPSL KVSVKGDGAS RRAAEQSAAK IALVAVLKAL PQESRKPKKT
RSAKKKAAKK EVTEEQLNLK LKG