Gene Pnuc_0382 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_0382 
Symbol 
ID5053160 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand
Start bp374155 
End bp375201 
Gene Length1047 bp 
Protein Length348 aa 
Translation table11 
GC content45% 
IMG OID640470533 
ProductFAD-dependent pyridine nucleotide-disulphide oxidoreductase 
Protein accessionYP_001155166 
Protein GI145588569 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0492] Thioredoxin reductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTTGCACT CACCTATAGA AGCCGATGCA GTCATTATTG GTGCCGGCCC TGTGGGTCTA 
TTTCAGGTTT TTGAACTGGG TCTCCTAGAA ATCAAGGCGC ATGTTATTGA CTCTCTTCCT
GAAGCAGGAG GTCAATGCAT CGAGTTATAC CCAGATAAAC CCATTTACGA TATTCCTGCA
GTACCAGTCT GCACTGGTCG TGAGCTGACT CAGAACCTAC TAAAACAAAT CGAGCCCTTT
GGTGCGCAAT TTCATTTAGG ACAAGAAGTG AGGACCCTGG AGCAACAAGC CGATGGGCGC
CTACTGATCG GCACTTCACA GAATCAATAC TTTTTGAGTA AAACCGTCTT CATTGCAGCT
GGCGTAGGTG CATTTCAGCC ACGCAAGCTC GCCCTGGAGG GGATTGAAGC TCTTGAAGAC
AAACATATTT TTTATCACGT AAAGCATCCG GAGCAATTTT CCGGAAAGAA AATAGTTATC
TGCGGTGGTG GAGACTCAGC TTTAGATTGG GCTTTATTCT TGGTAGAAAA AGCCGCCAGC
GTGACATTGA TTCATCGTCG CGATGACTTT AAAGCTGCCC CAAAATCAAT TGCAAAGATG
CGTGAGTTGT GTGCTTCCAA GCAAATGCAG TTGCTGATTG GGCAAATCAC TTCTTATGAA
GCGCAAGATG ATCATCTAAA AGAAATTGTC GTTACTGACA TTGATGGAAA AACTCAAGCA
CTACCAGTAG ATGATCTCCT CATTTTCTTT GGGCTTTCTC CAAAGTTAGG CCCCATTGCT
GAATGGGGCT TAGATATAGA GCGCAAGCAA CTTGTTGTGG ATACGGAAAA GTTTCAAACC
AGTATTCCTG GTATTTATGC AGTAGGTGAT ATCAATATTT ACCCTGGAAA AAAGAAACTC
ATTTTGTCAG GTTTTCATGA GGCCGCTTTA GCTGCTTTTG CTGCGGCAGC ATATCTGAAC
CCGGAAAAGC AGATTCAACT GCAATACACC ACCACCTCGC CCAAACTTCA TAAAGCACTT
GGTGTGGGCT CCCCCACATT CGAGTAA
 
Protein sequence
MLHSPIEADA VIIGAGPVGL FQVFELGLLE IKAHVIDSLP EAGGQCIELY PDKPIYDIPA 
VPVCTGRELT QNLLKQIEPF GAQFHLGQEV RTLEQQADGR LLIGTSQNQY FLSKTVFIAA
GVGAFQPRKL ALEGIEALED KHIFYHVKHP EQFSGKKIVI CGGGDSALDW ALFLVEKAAS
VTLIHRRDDF KAAPKSIAKM RELCASKQMQ LLIGQITSYE AQDDHLKEIV VTDIDGKTQA
LPVDDLLIFF GLSPKLGPIA EWGLDIERKQ LVVDTEKFQT SIPGIYAVGD INIYPGKKKL
ILSGFHEAAL AAFAAAAYLN PEKQIQLQYT TTSPKLHKAL GVGSPTFE