Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnuc_0355 |
Symbol | |
ID | 5052604 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
Kingdom | Bacteria |
Replicon accession | NC_009379 |
Strand | + |
Start bp | 349908 |
End bp | 351092 |
Gene Length | 1185 bp |
Protein Length | 394 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640470506 |
Product | extracellular ligand-binding receptor |
Protein accession | YP_001155139 |
Protein GI | 145588542 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACATTC GTCGTCACAT TTTTGCGGTA GCTGCAGCTA CCTTGTTTGC AACTGGTGCA TATGCCGCAG ATATTAAGGT GGGCGTTACT GGCCCGTATA CAGGTGGATC ATCCTCTATG GGCGTGAGCA TGCGTGATGG CGTCCGTTTG GCTGCTAAAG AAATTAATGC TGCTGGCGGT GTGAATGGCA ACAAGATTGT TTTGGTAGAA CGTGACGATG AAGCTAAAAA TGAGCGTGGC GTTCAAATCG CACAAGAGTT AATTAATAAT GAAAAAGTAG TAGCAACATT AGGTTTTATT AATACCGGCG TTTCATTGGC ATCACAGCGT TTTTATCAAG ACGCCAAGAT TCCTGTGTTT AATAACGTGG CTACAGGTTC TTTAATTACT CATCAGTTCC CAAATGCTGC TGAAAACTAT ATTTTCCGTA ACGCTGCTGC TGACAATATT CAAGCACCGA TGATTGCAAA AGAAGCCGTT GAAAAGCGTG GCTTAAAGAA AGTGGCCATC TTGGCTGACT CTACTAACTA CGGTCAGTTG GGTCGTGAAG ATTTGGAAAA AGCCCTGAAG ACATATGGCG TTACTCCAGT TGCTGAAGAA AAGTTCAACT TGGGTGATGT GGATATGACC TCACAGTTGC TTAAAGCAAA AAATGCTGGC GCTGATGTTG TTTTGACATA CGCAATCGGA CCAGAGTTGG CGCAAATTGC TAACGGTATG GCAAAGTTGG GCTGGAAGAA ACCTATGATT GGTAGCTGGA CATTGTCAAT GGCTAGCTTT ATTGATACTG CTGGTAAGAA TGGTGACGGT GCAACAATGC CCGAGACTTT TATTCAAAGC CCAGCAACTA CTCCAAAACG TAAAGCGTTC GTTGATGCTT ACCTTAAAGA GTTCAAGCCT AAGAATGGCG TGATTGCTTC TCCTGTTTCT GCTGCGCAAG GTTACGACTC TGTATACCTC TTGGCAGCTG CAATTAAGCA AGCAAACAGC ACAGAAGGAC CAAAGATTTT GGCTGCGCTT CAAGGTCTGA ATGCTCCAGT TGATGGCGTT GTAATGACTT ACAACAAGCC ATTCTCTGCA ACTGATCACG AAGCGATTAA AGCAAAAGAC GTGGTGATGG GTGTAGTTGA GGGTGGACGT GTTCAGTTCT TGAATGCGGA AGACGCAACT CCTAAGAAGA AGTAA
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Protein sequence | MNIRRHIFAV AAATLFATGA YAADIKVGVT GPYTGGSSSM GVSMRDGVRL AAKEINAAGG VNGNKIVLVE RDDEAKNERG VQIAQELINN EKVVATLGFI NTGVSLASQR FYQDAKIPVF NNVATGSLIT HQFPNAAENY IFRNAAADNI QAPMIAKEAV EKRGLKKVAI LADSTNYGQL GREDLEKALK TYGVTPVAEE KFNLGDVDMT SQLLKAKNAG ADVVLTYAIG PELAQIANGM AKLGWKKPMI GSWTLSMASF IDTAGKNGDG ATMPETFIQS PATTPKRKAF VDAYLKEFKP KNGVIASPVS AAQGYDSVYL LAAAIKQANS TEGPKILAAL QGLNAPVDGV VMTYNKPFSA TDHEAIKAKD VVMGVVEGGR VQFLNAEDAT PKKK
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