Gene Pnuc_0299 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_0299 
Symbol 
ID5053509 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand
Start bp289763 
End bp290305 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content48% 
IMG OID640470451 
ProductHPP family protein+B94 
Protein accessionYP_001155084 
Protein GI145588487 
COG category[T] Signal transduction mechanisms 
COG ID[COG3448] CBS-domain-containing membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACGAA GCCTTAAATA CCTTGTAAAG CATTATTCCT TTTACCTTGG CGGGGATCAA 
CCACCTGTGA ACTGGGCCGA ACGTCTTCGC TCGGTTGCAG GGGCTTTTCT GGGTTTATTG
ACCGTGTTTG TCATTGCCAA ATATCTTGGT GAACGTAGCG GTATCGATGA GTGGTTAATG
GCTTCATTAG GAGCAAGCGC TCTATTGGTA TTTGCATTAC CAGGTAGCCC CATGGCACAG
CCTTGGGCTG TAATTGCAGG CAATACCTTA TCGGCTTTAA TCGGAATTAG CTGCTTTCAT
CTGATTGGCG AGCCGCTATT GGCTCTGCCT ATGGCTGCAG CTTTCTCGAT ATTGGGCATG
TTTATCTTGC GCTGCCTACA CCCACCTGCC GCCGCAGTGT CTCTGATAGT GGTGTTAGGG
CACGTTGGCA ATTACCGATA TGCCCTGTTT CCGGTAATGA TTGATTCCAT CTTATTAATC
TTGGCCGGGG CGGCTTACAG CAATCTCACT GGTAAGCCTT ACCCCAATAG ACCGGCTATA
TAA
 
Protein sequence
MKRSLKYLVK HYSFYLGGDQ PPVNWAERLR SVAGAFLGLL TVFVIAKYLG ERSGIDEWLM 
ASLGASALLV FALPGSPMAQ PWAVIAGNTL SALIGISCFH LIGEPLLALP MAAAFSILGM
FILRCLHPPA AAVSLIVVLG HVGNYRYALF PVMIDSILLI LAGAAYSNLT GKPYPNRPAI