Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnuc_0279 |
Symbol | glyA |
ID | 5051903 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
Kingdom | Bacteria |
Replicon accession | NC_009379 |
Strand | + |
Start bp | 274122 |
End bp | 275366 |
Gene Length | 1245 bp |
Protein Length | 414 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640470431 |
Product | serine hydroxymethyltransferase |
Protein accession | YP_001155064 |
Protein GI | 145588467 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0112] Glycine/serine hydroxymethyltransferase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.681758 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTTTGACC GTCAAAACAC CCTTGCCAAA ACCGACCCGC AACTCTGGGC AGCTATTCAG AACGAAAACA AGCGTCAAGA AGACCATATT GAGCTGATTG CTTCTGAAAA CTATACTTCT CCAGCTGTCA TGGAAGCCCA AGGCTCCCAA TTGACCAATA AGTACGCTGA AGGTTATCCG GGCAAGCGTT ATTACGGTGG CTGTGAATTT GTCGACGTAG CTGAGCAATT AGCAATTGAT CGCGTTAAAG CATTGTTTGG TGCTGAGGCG GCCAACGTTC AACCTCATTG CGGAGCATCT GCTAACCAAG CGGTGTTCTT GGCTTTCTTA AAACCTGGCG ATACTTTTAT GGGTATGAGC TTGGCTGAAG GCGGTCACTT GACTCATGGT ATGGCTCTGA ATATGAGTGG TAAGTGGTTC AACCCAATTG CTTATGGCTT AGATAAAAAT GAAGAAATTG ATTACGAGCA AATGGAGCGT TTAGCTCGTG AGCACAAACC AAAATTGATT ATTGCTGGTG CATCTGCTTA CTCTAAAAAA ATTGATTTTG AGCGCATTGG TAAGTTGGCT AAAGAAGTGG GCGCAATCTT TATGGTGGAC ATGGCTCACT ATGCTGGTCT AGTTGCTGCA GGCGTTTATC CAAACCCAGT GCCACATGCT GACATCGTCA CATCGACTAC TCACAAGAGT TTGCGCGGCC CTCGTGGCGG CATCATCTTG ATGAAGGCTG AGCATGAGAA AGCCATTAAC TCTGCAGTCT TCCCAGGCTT GCAGGGCGGG CCTTTGATGC ATGTGATTGC GGGTAAAGCG GCAGCATTTA AAGAAGCAGC AGAGCCTGGT TTTAAAGATT ACCAAAAGCA AGTTGTAGCG AATGCCAAAG CATTGGCTGA GACATTAATT GCTCGCGGCC TGCGCATTGT TTCAGGTGGT ACTGACTCTC ACGTGATGCT CGTTGATCTG CGTGCTAAGA AAATGACTGG TAAAGAAGCG GAACATGTTT TGGGTGAAGC GCATATCACT TGTAACAAGA ATGGCATTCC GAATGATCCA GAAAAACCAA TGGTGACTAG TGGTATTCGT TTAGGGTCAC CAGCAATGAC TACGCGTGGT TTTAAAGAAG CTGAAGCAGT TCAAGTGGGC AACTTCATTG CTGATGTTTT AGATAACCCA AATGATCCAG AGAATATTGC TAAGGTACGC GCTCAAGTTG CTGAGTTAAC GAAGCGCTTC CCGGTTTACG GTTAA
|
Protein sequence | MFDRQNTLAK TDPQLWAAIQ NENKRQEDHI ELIASENYTS PAVMEAQGSQ LTNKYAEGYP GKRYYGGCEF VDVAEQLAID RVKALFGAEA ANVQPHCGAS ANQAVFLAFL KPGDTFMGMS LAEGGHLTHG MALNMSGKWF NPIAYGLDKN EEIDYEQMER LAREHKPKLI IAGASAYSKK IDFERIGKLA KEVGAIFMVD MAHYAGLVAA GVYPNPVPHA DIVTSTTHKS LRGPRGGIIL MKAEHEKAIN SAVFPGLQGG PLMHVIAGKA AAFKEAAEPG FKDYQKQVVA NAKALAETLI ARGLRIVSGG TDSHVMLVDL RAKKMTGKEA EHVLGEAHIT CNKNGIPNDP EKPMVTSGIR LGSPAMTTRG FKEAEAVQVG NFIADVLDNP NDPENIAKVR AQVAELTKRF PVYG
|
| |