Gene Pnuc_0279 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_0279 
SymbolglyA 
ID5051903 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand
Start bp274122 
End bp275366 
Gene Length1245 bp 
Protein Length414 aa 
Translation table11 
GC content46% 
IMG OID640470431 
Productserine hydroxymethyltransferase 
Protein accessionYP_001155064 
Protein GI145588467 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0112] Glycine/serine hydroxymethyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.681758 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTGACC GTCAAAACAC CCTTGCCAAA ACCGACCCGC AACTCTGGGC AGCTATTCAG 
AACGAAAACA AGCGTCAAGA AGACCATATT GAGCTGATTG CTTCTGAAAA CTATACTTCT
CCAGCTGTCA TGGAAGCCCA AGGCTCCCAA TTGACCAATA AGTACGCTGA AGGTTATCCG
GGCAAGCGTT ATTACGGTGG CTGTGAATTT GTCGACGTAG CTGAGCAATT AGCAATTGAT
CGCGTTAAAG CATTGTTTGG TGCTGAGGCG GCCAACGTTC AACCTCATTG CGGAGCATCT
GCTAACCAAG CGGTGTTCTT GGCTTTCTTA AAACCTGGCG ATACTTTTAT GGGTATGAGC
TTGGCTGAAG GCGGTCACTT GACTCATGGT ATGGCTCTGA ATATGAGTGG TAAGTGGTTC
AACCCAATTG CTTATGGCTT AGATAAAAAT GAAGAAATTG ATTACGAGCA AATGGAGCGT
TTAGCTCGTG AGCACAAACC AAAATTGATT ATTGCTGGTG CATCTGCTTA CTCTAAAAAA
ATTGATTTTG AGCGCATTGG TAAGTTGGCT AAAGAAGTGG GCGCAATCTT TATGGTGGAC
ATGGCTCACT ATGCTGGTCT AGTTGCTGCA GGCGTTTATC CAAACCCAGT GCCACATGCT
GACATCGTCA CATCGACTAC TCACAAGAGT TTGCGCGGCC CTCGTGGCGG CATCATCTTG
ATGAAGGCTG AGCATGAGAA AGCCATTAAC TCTGCAGTCT TCCCAGGCTT GCAGGGCGGG
CCTTTGATGC ATGTGATTGC GGGTAAAGCG GCAGCATTTA AAGAAGCAGC AGAGCCTGGT
TTTAAAGATT ACCAAAAGCA AGTTGTAGCG AATGCCAAAG CATTGGCTGA GACATTAATT
GCTCGCGGCC TGCGCATTGT TTCAGGTGGT ACTGACTCTC ACGTGATGCT CGTTGATCTG
CGTGCTAAGA AAATGACTGG TAAAGAAGCG GAACATGTTT TGGGTGAAGC GCATATCACT
TGTAACAAGA ATGGCATTCC GAATGATCCA GAAAAACCAA TGGTGACTAG TGGTATTCGT
TTAGGGTCAC CAGCAATGAC TACGCGTGGT TTTAAAGAAG CTGAAGCAGT TCAAGTGGGC
AACTTCATTG CTGATGTTTT AGATAACCCA AATGATCCAG AGAATATTGC TAAGGTACGC
GCTCAAGTTG CTGAGTTAAC GAAGCGCTTC CCGGTTTACG GTTAA
 
Protein sequence
MFDRQNTLAK TDPQLWAAIQ NENKRQEDHI ELIASENYTS PAVMEAQGSQ LTNKYAEGYP 
GKRYYGGCEF VDVAEQLAID RVKALFGAEA ANVQPHCGAS ANQAVFLAFL KPGDTFMGMS
LAEGGHLTHG MALNMSGKWF NPIAYGLDKN EEIDYEQMER LAREHKPKLI IAGASAYSKK
IDFERIGKLA KEVGAIFMVD MAHYAGLVAA GVYPNPVPHA DIVTSTTHKS LRGPRGGIIL
MKAEHEKAIN SAVFPGLQGG PLMHVIAGKA AAFKEAAEPG FKDYQKQVVA NAKALAETLI
ARGLRIVSGG TDSHVMLVDL RAKKMTGKEA EHVLGEAHIT CNKNGIPNDP EKPMVTSGIR
LGSPAMTTRG FKEAEAVQVG NFIADVLDNP NDPENIAKVR AQVAELTKRF PVYG