| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_0273 |
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| Symbol | |
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| ID | 5052631 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | - |
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| Start bp | 269389 |
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| End bp | 270120 |
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| Gene Length | 732 bp |
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| Protein Length | 243 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640470425 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_001155058 |
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| Protein GI | 145588461 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1729] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR02795] tol-pal system protein YbgF |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0105531 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAACTT CTTCACAAGC TTTCAAACAA ACGCTCTCAC GAGCGTTTTG TTTAAGTGCC
GCCGTCATTT GCTTGGGCGC ATCCAATAGT GCATGGGCAC TCTTCTCAGA TGATGAAGCA
CGCAAGGCCA TTCTCGACTT ACGTAAGTCA CTGGCTACCA CGCAACTGGA ATTACAAGGC
GAGATTGACA AGCTCAAAAC AGAAAATGCT GAGCTGCGTG GCAAGCTTGA AAATCTCGAA
AAGCAAGGTG AAGACATCTC CAGTAGCCAA AAGACGTATT ACCAAGATCT GGATACGCGT
CTAGGTAATT TTGAGCCTCG CACAATCACC ATTGAAGGTC TGAGCGGCAC CGTGCAGCCT
GGCGAGAAAA AAGCGTATGA CGATGCCTTA AAAGCATTCC AGGCAGGCAA TCTCAAAAAG
GCAGATGAAG GTTTTTCCGC CTTTGCAGCA AAGTATCCTA AGAGTCCTTA TTTGCCTCTC
GCACTTTACT GGAGCGGCAA TAGCAAATAC GCCAACAAAG ATTATGCTGG CGCGATTAGC
CAACTTCAAA GCCTCATTAA GCGCTATCCC AACCATCCTC GTATTCCTGC GGCCATGGTG
ACATTAGGCA ATTCGCAATT AGAGAGTGGC AACAAAGCAG CGGCCAAAAA AACCTTTAGT
GAAATTATTG CTAAATACCC AGACACTGAT GCAGCTAAAG ATGCGCAGCA ACTGATGGCT
GCTACGAAGT AA
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| Protein sequence | MKTSSQAFKQ TLSRAFCLSA AVICLGASNS AWALFSDDEA RKAILDLRKS LATTQLELQG
EIDKLKTENA ELRGKLENLE KQGEDISSSQ KTYYQDLDTR LGNFEPRTIT IEGLSGTVQP
GEKKAYDDAL KAFQAGNLKK ADEGFSAFAA KYPKSPYLPL ALYWSGNSKY ANKDYAGAIS
QLQSLIKRYP NHPRIPAAMV TLGNSQLESG NKAAAKKTFS EIIAKYPDTD AAKDAQQLMA
ATK
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