| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_0272 |
|---|
| Symbol | |
|---|
| ID | 5053170 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009379 |
|---|
| Strand | - |
|---|
| Start bp | 268640 |
|---|
| End bp | 269380 |
|---|
| Gene Length | 741 bp |
|---|
| Protein Length | 246 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 640470424 |
|---|
| Product | exsB protein |
|---|
| Protein accession | YP_001155057 |
|---|
| Protein GI | 145588460 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0603] Predicted PP-loop superfamily ATPase |
|---|
| TIGRFAM ID | [TIGR00364] exsB protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.281019 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCTTCGT TATCAGCTGC ATATCAAAAT CTAGCGCCAC GTAAAGATGG CGCGCCAGCT
GTTATTTTAT TTTCTGGTGG TCTAGATTCC ACTACGGTTC TAGCTCTTGC AAAAGATTTG
GGTTACACCC CTTATGCGCT CTCCGTAGGC TATGGTCAGC GTCATTCATC TGAATTAGCT
GCTGCTAAAC ATATCGCCAA GCAAATTGGT GTCGCTCGTC ATGAGGTGGT AAATTTAGAT
TTAACCCGCT TTGGTGGCTC AGCCTTAACT GACTCATCCA TTGCCGTTCC TACGACCCCA
GGCAAAGATC AAGAGATCCC TGTCACTTAT GTCCCTGCGC GTAATACGAT TTTGCTATCA
CTTGCTTTAG GATGGGCTGA ATCACTAGGT GGCTTAGATG TGTTTTATGG GGCTAACTCA
GTGGATTACT CGGGCTATCC AGATTGCCGT CCCGAGTATG TAGCCTCTTT TGAAACCATG
GCTAATCTAG CAACTAAGGC CGGTGTTGAG GCCATTAATA ATGAAAATCG CTTTCGGGTA
CACGCCCCGA TCATCAGCTT AACTAAGGCT GAGATTATTC AACTAGGCAG CACGCTTGGG
GTAGATTACT CGCAAACAGT ATCGTGCTAT CAAGCCAATG ACTTAGGTGA AGCTTGTGGT
GAATGTGAAT CTTGTCGCCT TAGGCAAATT GGCTTTAAGC AGGCCAATGT GATTGACCCA
ACTCGCTATC AAAAAAAATA A
|
|---|
| Protein sequence | MSSLSAAYQN LAPRKDGAPA VILFSGGLDS TTVLALAKDL GYTPYALSVG YGQRHSSELA
AAKHIAKQIG VARHEVVNLD LTRFGGSALT DSSIAVPTTP GKDQEIPVTY VPARNTILLS
LALGWAESLG GLDVFYGANS VDYSGYPDCR PEYVASFETM ANLATKAGVE AINNENRFRV
HAPIISLTKA EIIQLGSTLG VDYSQTVSCY QANDLGEACG ECESCRLRQI GFKQANVIDP
TRYQKK
|
|---|
| |