Gene Pnuc_0266 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_0266 
Symbol 
ID5053150 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand- 
Start bp263847 
End bp264992 
Gene Length1146 bp 
Protein Length381 aa 
Translation table11 
GC content49% 
IMG OID640470418 
Product3,4-dihydroxy-2-butanone 4-phosphate synthase 
Protein accessionYP_001155051 
Protein GI145588454 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0108] 3,4-dihydroxy-2-butanone 4-phosphate synthase
[COG0807] GTP cyclohydrolase II 
TIGRFAM ID[TIGR00506] 3,4-dihydroxy-2-butanone 4-phosphate synthase 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCAAATA AGCTCGCCCC TACTGAAGAA ATCATTGCCG AACTCCGTGC CGGCAAGATG 
GTCATTCTCG TTGACGAAGA AGATCGTGAA AATGAAGGGG ATCTAGTTCT GGCTGCAGAT 
CATGTCACAG CCGAAGCAGT CAATTTCATG GCCAAACATG GCCGCGGCTT AATCTGTCTC 
ACCCTCACAC GTGAGCGCTG CCAGCAACTC AATCTTCCGC TGATGGTGCG CGACAACGGC 
ACATCGATGG GTACCAATTT CACAGTCTCT ATTGAGGCAG CAACTGGAGT AACGACTGGA 
ATCTCTGCTG CAGATCGCGC CCTAACCATT AAAACAGCGG TCGCGCCCAA TGCCAAACCG 
AGCGATCTAG TGCAACCTGG CCATATCTTC CCTTTAATGG CACAGCCCGG TGGCGTACTC 
ATCCGTTCCG GTCATACCGA AGCAGGTTGT GATTTGGCTG CCATGGCTGG ATGCTCTCCT 
ACTGCTGTCA TCTGCGAAAT CATGAAAGAT GATGGCAGCA TGGCACGCTT GCCTGACCTT 
CTCAAATTTG CAGAAGAACA TCAACTTAAG ATTGGCAGCA TTGCGGACTT GATTCAATAC 
CGCAGTCAAC ATGAAAGTAT TGTGGTTCGA GAAGGCCAAA GAGAATTTGT AACGCCTTGG 
GGAAAGTTTC AAGGAATTAT TTACCGCGAT ACTCCCAGCT CTTGCATTCA TATTGCACTC 
GTGCACGGCC AGCCATCTGA AGCACAAGAA ACCTTGGTAC GAGTTCACGA GCCCGTTACC 
GTATTAGATT TTTTAGATGC CGATGTCAGC ACCCATTCAT GGCCCCTGGC TAAGGCCCTA 
GAGCAGTTAG CTAACTCTCC AGCTGGTGTA GCAGTACTCC TTAATGCTTC AGGCATTGCA 
GCGCCTAACG ATGCAGATTG GTTGGCGCAG TTTCAAAAGC TAAATCAAAC ACAAGATGAG 
ACCAAAATCC CATTAACCCG CAAAACTGAT TTCAGAAGTT ATGGAATTGG CGCGCAAATC 
CTCAAGGATA TTGGTGTTGG CAAGATGCGC TTGCTAGCAA ACCCAAGCCC TACACCAAGC 
CTTTCCGGAT ATAAATTAGA AGTGACAGGC TACGCTCCTT ATCAGCCAGT TACCAAACCC 
GCTTAA
 
Protein sequence
MPNKLAPTEE IIAELRAGKM VILVDEEDRE NEGDLVLAAD HVTAEAVNFM AKHGRGLICL 
TLTRERCQQL NLPLMVRDNG TSMGTNFTVS IEAATGVTTG ISAADRALTI KTAVAPNAKP 
SDLVQPGHIF PLMAQPGGVL IRSGHTEAGC DLAAMAGCSP TAVICEIMKD DGSMARLPDL 
LKFAEEHQLK IGSIADLIQY RSQHESIVVR EGQREFVTPW GKFQGIIYRD TPSSCIHIAL 
VHGQPSEAQE TLVRVHEPVT VLDFLDADVS THSWPLAKAL EQLANSPAGV AVLLNASGIA 
APNDADWLAQ FQKLNQTQDE TKIPLTRKTD FRSYGIGAQI LKDIGVGKMR LLANPSPTPS 
LSGYKLEVTG YAPYQPVTKP A