| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_0263 |
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| Symbol | |
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| ID | 5054011 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | - |
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| Start bp | 261149 |
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| End bp | 262621 |
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| Gene Length | 1473 bp |
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| Protein Length | 490 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640470415 |
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| Product | succinic semialdehyde dehydrogenase |
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| Protein accession | YP_001155048 |
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| Protein GI | 145588451 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
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| TIGRFAM ID | [TIGR01780] succinate-semialdehyde dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAAAGA TTGACATTCG CAGTTTCTTA AAAGATCCAA GCCTATTTAA AGAACAGGCG
TTTATTAATG GGCAATGGGT TGGATCCAAA GAAAATTTTA ATGTTCAAAA TCCAGCGACT
GATGAGCTTA TTGCTTCAGT AAGCAACCTT GGGCCGCAAG ATGCGGAACT CGCGATTGCC
GCGGCAGAAA AAGCGCTTCC AGCATGGCGC AATAAAACGG GCAAAGAGCG TGCCCACATC
ATGCGCAAGT GGTTTGATTT GATTACTGAG AGTACTCAAG ACTTAGCGAC AATCATGACC
TTAGAGCAAG GTAAGCCCTT GGCAGAAGCT GCCGGTGAAG TCGCTTATGG CGCCTCATTT
GTTGAATGGT TTGCTGAAGA AGCAAAACGA GTCGCTGGCT CAATACCTGC CACTACCTGG
GGTGATAAGC GCATGATGGT ACTCAAACAA CCGATTGGTG TTTGCGTTGC CATCACCCCC
TGGAACTTTC CAATAGCCAT GATCACCCGC AAGGTAGCGC CAGCGCTAGC GGCTGGCTGC
ACGATTGTCA TCAAGCCTGC TGAACTCACT CCGCTGTCCG CATTGGCACT TGCTGAATTA
GCTATTCGTG CAGGCATTCC GGATGGCGTG ATTAATATTT TGACTGCGGA TGCCAATCAA
TCCATTCTCA TTGGTAAGAC GCTTTGCGCC TCACCCACAG TAAGGCATCT CTCCTTTACA
GGCTCTACTG AGGTAGGTCG CATTTTGATG GGGCAATGCG CGCCTACTGT TAAAAAATTG
GCTCTTGAGC TTGGTGGGCA TGCGCCATTT ATCGTGTTTG ATGATGCTGA TATTGATGCT
GCAGTAATTG GCGCTATTGC TTCTAAATTT AGAAACTCTG GCCAAACCTG TGTTTGCGCC
AATCGCTTTT ATGTTCACAA GAAAGTGCAT GACCAGTTTG TTGAAAAATT TGCTCAAGCA
ATTACAAAAA TTAAAGTAGG CAATGGTATG GAGCCAGGCG TTACTCAAGG CCCGCTGATT
GAAACGGCTG CTTTAGAAAA AGCGGAGAAG CACGTAGCCG ATGCCATTAG TAAAGGTGCC
AAATTAGTCA CTGGCGGAAA ACCTACCACC CAAGGAAAAA ACTTTTACGA ACCGACCATC
TTGGCCAATG TAAACAGTGA CATGCTCATT ACCCAAGAGG AAACTTTTGG ACCTGTTGCC
CCCATTATTC CGTTTGAGAA TGACGAAGAA GCGGTTGCCT TAGCAAATAA CAGCCCATTT
GGACTGGCGT CCTATTTTTA TAGTCGCGAC ATTGGCCGTA TTTGGAAGGT AGCCGAAGCT
TTGGACTATG GCATGGTAGG CGTGAATACC GGCCTCATTA CTAATGAAGT TGCGCCATTT
GGAGGGGTAA AGCAATCCGG ATTAGGTCGA GAAGGCAGCG CTTATGGAAT GGATGAATAC
CTAGAAATGA AATATGTTTG CGTAGGCCTT TAA
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| Protein sequence | MQKIDIRSFL KDPSLFKEQA FINGQWVGSK ENFNVQNPAT DELIASVSNL GPQDAELAIA
AAEKALPAWR NKTGKERAHI MRKWFDLITE STQDLATIMT LEQGKPLAEA AGEVAYGASF
VEWFAEEAKR VAGSIPATTW GDKRMMVLKQ PIGVCVAITP WNFPIAMITR KVAPALAAGC
TIVIKPAELT PLSALALAEL AIRAGIPDGV INILTADANQ SILIGKTLCA SPTVRHLSFT
GSTEVGRILM GQCAPTVKKL ALELGGHAPF IVFDDADIDA AVIGAIASKF RNSGQTCVCA
NRFYVHKKVH DQFVEKFAQA ITKIKVGNGM EPGVTQGPLI ETAALEKAEK HVADAISKGA
KLVTGGKPTT QGKNFYEPTI LANVNSDMLI TQEETFGPVA PIIPFENDEE AVALANNSPF
GLASYFYSRD IGRIWKVAEA LDYGMVGVNT GLITNEVAPF GGVKQSGLGR EGSAYGMDEY
LEMKYVCVGL
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