Gene Pnuc_0252 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_0252 
Symbol 
ID5053865 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand+ 
Start bp250877 
End bp251644 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content38% 
IMG OID640470404 
Producthypothetical protein 
Protein accessionYP_001155037 
Protein GI145588440 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.00523387 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTGAGC ATTTAGATCC CTATTCGGTA GTTATCACCA CCTTTGATAA GCGCTTTGAT 
GCTTTTTTTG TACCCTTATT GGCTCAAATC AAATCGCAGC GGCCTAATAT TGAGGTCATT 
GTTACTATCA ATGGGCCAGC CAAAAGTTCT TTTGATGAGG GCTATCGTGC TCACATCTTG 
TCTTATCTTG CGCAGTTCCC GCAAGTTTTT CCAACAATGT TTCCTAGCTT TCAATCATTA 
GCCAAGATGT GGAATCGTGG AGCCTTGAAT ACCAGTCATA ATCGCGCCCT CGTTTTGAAT 
GACGACTTGG AACTGAAGAC TGAGAATGGC GTCAGTTTCT TTGATGGCCT GGAAACTGCA 
TTAGCAAGTC AAGCGGGTAC TTTTAAAATT AATGGTAGCT TTTCTCATTT CATTTTGGAT 
AAGCGAGAAT TAATTGACGT CGGATTTTTT GATGAGCGCC TTTTAGGCTT AGGTGAAGAA 
GATGGTGATT TCTTCTGGCG TTTTTATAAA AAATACAAAA AAGAAATTCC AAGTGTGGAC 
ATAGGTTTAA TTGATAATGT TCAGTCTGAT TTAGCGGATG ATGGCTATAC CAAGGGTATT 
AGGACAGCCT CTAAATTCAA CCGCGATTTT TTACAGACTC AGAAATATAA GAATACTCTC 
TTGGGTGGTT ATCGCGGTAT GTTTGATAAG AAGGTAAATC AAATTTTAGA GGATGAAAAA 
CAATATCCTT ATGAATCTTT TTATTTAGAA AATAAGAACA AGCTTTAA
 
Protein sequence
MAEHLDPYSV VITTFDKRFD AFFVPLLAQI KSQRPNIEVI VTINGPAKSS FDEGYRAHIL 
SYLAQFPQVF PTMFPSFQSL AKMWNRGALN TSHNRALVLN DDLELKTENG VSFFDGLETA 
LASQAGTFKI NGSFSHFILD KRELIDVGFF DERLLGLGEE DGDFFWRFYK KYKKEIPSVD 
IGLIDNVQSD LADDGYTKGI RTASKFNRDF LQTQKYKNTL LGGYRGMFDK KVNQILEDEK 
QYPYESFYLE NKNKL