Gene Pnuc_0231 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_0231 
Symbol 
ID5053890 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand
Start bp230009 
End bp230812 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content45% 
IMG OID640470383 
Productdihydrodipicolinate reductase 
Protein accessionYP_001155016 
Protein GI145588419 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0289] Dihydrodipicolinate reductase 
TIGRFAM ID[TIGR00036] dihydrodipicolinate reductase 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGAAGA TTGCAATTGC TGGTGCAACT GGCCGCATGG GAAGAATGTT AATTGAGACT 
GTTTTCAATT CACCGGATGC TCAACTCGTA GGGGCCTTGG AGCATAACTC CTGTCCGCAA
TTAGGCGAAG ATGCTGGTTC ATTTTTAGGC AAAAAAACAG GAGTCATCAT TTCTTCAGAT
GTTGCAGCGG TGTTAGCAAA TGCAGAGTTT TTAATTGATT TCACAAGACC TGATGGCACC
ATGGCCCATT TAGCTGTGGC AGAAAAAACG GGTACCAAAA TGATTATTGG TACAACAGGG
CTAAGCAGCG AGCAGATTGG GGATTTAAAA AAAGCATCTG CTAAGTTGGC AATTGTGTTT
GCACCCAATA TGAGTGTTGG TGTAAATGCT ACATTTAAGT TGTTAGAAAT TGCCGCCAAG
ATGTTGAATG AGGGTTACGA CATTGAGATA GTTGAAGCGC ATCATCGTCA CAAAGTAGAC
GCACCCTCAG GCACAGCGTT GAAGATGGGT GAAGTCATTG CAGAAGCCTT GGGTGAAAAA
CTGGATGATG TCGCAGTCTA TGCACGTGAA GGTCATACAG GTGAGCGCAA ACCGGGCTCG
ATTGGCTTTG CAACTATTCG CGGTGGCGAT ATTGTTGGTG ACCATACCGT ATTGTTTGCT
GGTGATGGTG AGCGTATTGA AATTAGTCAT AAATCCTCGA GCCGCCAGTC ATATGCGCAA
GGCTCCTTAC GCGCTGCACG TTTTTTACAG AATCAAACCT TTGGACTGTA TGACATGCAG
GATGTCTTGG GTTTACGTAA ATAA
 
Protein sequence
MMKIAIAGAT GRMGRMLIET VFNSPDAQLV GALEHNSCPQ LGEDAGSFLG KKTGVIISSD 
VAAVLANAEF LIDFTRPDGT MAHLAVAEKT GTKMIIGTTG LSSEQIGDLK KASAKLAIVF
APNMSVGVNA TFKLLEIAAK MLNEGYDIEI VEAHHRHKVD APSGTALKMG EVIAEALGEK
LDDVAVYARE GHTGERKPGS IGFATIRGGD IVGDHTVLFA GDGERIEISH KSSSRQSYAQ
GSLRAARFLQ NQTFGLYDMQ DVLGLRK