Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnuc_0231 |
Symbol | |
ID | 5053890 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
Kingdom | Bacteria |
Replicon accession | NC_009379 |
Strand | + |
Start bp | 230009 |
End bp | 230812 |
Gene Length | 804 bp |
Protein Length | 267 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640470383 |
Product | dihydrodipicolinate reductase |
Protein accession | YP_001155016 |
Protein GI | 145588419 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0289] Dihydrodipicolinate reductase |
TIGRFAM ID | [TIGR00036] dihydrodipicolinate reductase |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGAAGA TTGCAATTGC TGGTGCAACT GGCCGCATGG GAAGAATGTT AATTGAGACT GTTTTCAATT CACCGGATGC TCAACTCGTA GGGGCCTTGG AGCATAACTC CTGTCCGCAA TTAGGCGAAG ATGCTGGTTC ATTTTTAGGC AAAAAAACAG GAGTCATCAT TTCTTCAGAT GTTGCAGCGG TGTTAGCAAA TGCAGAGTTT TTAATTGATT TCACAAGACC TGATGGCACC ATGGCCCATT TAGCTGTGGC AGAAAAAACG GGTACCAAAA TGATTATTGG TACAACAGGG CTAAGCAGCG AGCAGATTGG GGATTTAAAA AAAGCATCTG CTAAGTTGGC AATTGTGTTT GCACCCAATA TGAGTGTTGG TGTAAATGCT ACATTTAAGT TGTTAGAAAT TGCCGCCAAG ATGTTGAATG AGGGTTACGA CATTGAGATA GTTGAAGCGC ATCATCGTCA CAAAGTAGAC GCACCCTCAG GCACAGCGTT GAAGATGGGT GAAGTCATTG CAGAAGCCTT GGGTGAAAAA CTGGATGATG TCGCAGTCTA TGCACGTGAA GGTCATACAG GTGAGCGCAA ACCGGGCTCG ATTGGCTTTG CAACTATTCG CGGTGGCGAT ATTGTTGGTG ACCATACCGT ATTGTTTGCT GGTGATGGTG AGCGTATTGA AATTAGTCAT AAATCCTCGA GCCGCCAGTC ATATGCGCAA GGCTCCTTAC GCGCTGCACG TTTTTTACAG AATCAAACCT TTGGACTGTA TGACATGCAG GATGTCTTGG GTTTACGTAA ATAA
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Protein sequence | MMKIAIAGAT GRMGRMLIET VFNSPDAQLV GALEHNSCPQ LGEDAGSFLG KKTGVIISSD VAAVLANAEF LIDFTRPDGT MAHLAVAEKT GTKMIIGTTG LSSEQIGDLK KASAKLAIVF APNMSVGVNA TFKLLEIAAK MLNEGYDIEI VEAHHRHKVD APSGTALKMG EVIAEALGEK LDDVAVYARE GHTGERKPGS IGFATIRGGD IVGDHTVLFA GDGERIEISH KSSSRQSYAQ GSLRAARFLQ NQTFGLYDMQ DVLGLRK
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