Gene Pnuc_0223 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_0223 
Symbol 
ID5053562 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand- 
Start bp220544 
End bp221563 
Gene Length1020 bp 
Protein Length339 aa 
Translation table11 
GC content46% 
IMG OID640470375 
Productthiamine-monophosphate kinase 
Protein accessionYP_001155008 
Protein GI145588411 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0611] Thiamine monophosphate kinase 
TIGRFAM ID[TIGR01379] thiamine-monophosphate kinase 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCACTCAC CATCTAACCC CATAGGGGAA TTTGACCTGA TTGAACGTTT TTTTAAAACG 
GGTACGAGTG CGACTGAACA AAATGAAAAC ATCCCCCTTG GAATCGGTGA TGATTGCGCC 
CTAATCAAGC AAGCTACGGA CTCAGAGATA GCCATTACCA CCGATATGCT GGTCGAAGGA 
AGGCACTTTT TTGCTGGCGC CGACCCTGAG CAATTAGGCC GCAAAGCCTT AGCAGTCAAC 
CTTTCCGACC TAGCAGCCAT GGGCGCTGAG CCGCTTGGCT TTACCTTGGC GATAGCGATG 
CCAAAAGCGG ATATTGCTTG GCTAGAGGCT TTTTCAAAAG GTTTGCTGGA CAGTGCAAAC 
CTCTATGGTT GCCCACTCAT TGGGGGCGAT ACCACTGCCG GCCCGCTGAC TTTGTCGATC 
ACTGCACTGG GCAATATTCC CCAAGGGAAA GCCATTCGCA GATCAGGGGC AAAGATTGAA 
GATGATGTGT GGGTTTCTGG CAACGTTGGG GATGCAAGAC TTGCTCTTGC TGCACTGCGT 
CATGAAATCC CCCTTTCCGC AGAAGATCTA AAACAAGTTG AGAAACGCAT GCATCAACCG 
ACCCCAAGAA TTGAATTGGG AATAGGTTTG CGAGATATTG CTACTGCCGC ACTCGATATT 
TCAGATGGCT TGCTCGGTGA TTTGAATCAT GTCTTAAAAC AATCTCAGGT TGATGCGCAA 
ATTTTCTTAA ACCAAATACC GAAGTCAGAG ACTTTAAAAA AACAAAGTAC TGATATACAA 
AATCAATTTG CTGCGAGCGG CGGTGATGAC TACGAGATTT GCTTTACTGC ACCAAATCAT 
CAACGTGAGG CCATTAAAAA ATTAAGCAAG TCTCTCGATT TACCTTTGAC TCTGATTGGT 
CGAATCATCC CCATCAAAAA TAAAAATCCC CAAGTCCATT TAATTAATTC GGATGGAGCC 
ACTATGAGTG CCATCGAGAG CAAAAAACTG CTTCAATCAT TCGATCATTT TTCATCATGA
 
Protein sequence
MHSPSNPIGE FDLIERFFKT GTSATEQNEN IPLGIGDDCA LIKQATDSEI AITTDMLVEG 
RHFFAGADPE QLGRKALAVN LSDLAAMGAE PLGFTLAIAM PKADIAWLEA FSKGLLDSAN 
LYGCPLIGGD TTAGPLTLSI TALGNIPQGK AIRRSGAKIE DDVWVSGNVG DARLALAALR 
HEIPLSAEDL KQVEKRMHQP TPRIELGIGL RDIATAALDI SDGLLGDLNH VLKQSQVDAQ 
IFLNQIPKSE TLKKQSTDIQ NQFAASGGDD YEICFTAPNH QREAIKKLSK SLDLPLTLIG 
RIIPIKNKNP QVHLINSDGA TMSAIESKKL LQSFDHFSS