Gene Pnuc_0194 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_0194 
SymbolrplU 
ID5053754 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand
Start bp191192 
End bp191503 
Gene Length312 bp 
Protein Length103 aa 
Translation table11 
GC content46% 
IMG OID640470346 
Product50S ribosomal protein L21 
Protein accessionYP_001154979 
Protein GI145588382 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0261] Ribosomal protein L21 
TIGRFAM ID[TIGR00061] ribosomal protein L21 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value3.99206e-05 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTACGCGG TCATAAAAAC CGGTGGCAAA CAGTATAAAG TTGCTGCAGG CGAAAAATTG 
AAAATAGAAC AGATACCAGC GGAAATCGGC AGCGAAATCA CTCTTGACCA AGTCCTCGCC
GTAGGCGAAG GCGCTTCACT GAAATTAGGT GATCCATTGG TTAATGGTGC AGCTGTGATG
GCCACTGTCG TCTCCCAGGG ACGTCACGAT AAAGTGACAA TCTTTAAGAT GCGCCGTCGC
AAGCATTATC AAAAGCACCA AGGCCATCGT CAGAATTTCA CTGAAATTTT GATCAACACG
ATTAAAGCCT AA
 
Protein sequence
MYAVIKTGGK QYKVAAGEKL KIEQIPAEIG SEITLDQVLA VGEGASLKLG DPLVNGAAVM 
ATVVSQGRHD KVTIFKMRRR KHYQKHQGHR QNFTEILINT IKA