| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_0193 |
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| Symbol | |
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| ID | 5053629 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | - |
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| Start bp | 190112 |
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| End bp | 191116 |
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| Gene Length | 1005 bp |
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| Protein Length | 334 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640470345 |
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| Product | farnesyltranstransferase |
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| Protein accession | YP_001154978 |
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| Protein GI | 145588381 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.000332441 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGAGCA CTGTCAAAAC CAATGAACTA AGCCAAATCT TAGCCCCAAT TTCCTTAGAA
TTCAAGGGGT TAGATGAGGT TATTCGCCTT AGGCTAGCGT CAAAAGTCGC CCTCATTGAC
CAAATCTCCA CATATATCAT CCAGGCGGGC GGAAAGCGGG TTAGGCCGGC CCTCCTCATG
CTGGTAGCCA AGGCTCTAGC CAATGGCAAA GAATCTGCAC ACACTTTAGA GATGGCGGCG
GTAGTCGAGT TCATCCATAC CGCCACCCTT CTGCACGATG ACGTAGTTGA TGAATCTACC
CTCAGAAGAG GTCGAGAAAC TGCCAATGCC GCCTTCGGTA ATGCAGCAAG CGTTTTAGTG
GGCGATTTTT TATACTCCAG AGCCTTCCAG ATGATGGTTG CTCCAAATGA CCTGAGAGTC
ATGCAAATTC TTTCGGATGC TACCAACACG ATTGCTGAAG GCGAAGTCTT GCAGCTCTTG
AATATGAATG ACCCAGAAGT AGATGAAGCC AGCTACCTAC AAGTCATTCG CTATAAAACT
GCCAAATTAT TTGAGGCCTC TACTGAGCTT GGCGCGATAT TAGCCAGCGC GACAGATAGC
CAACGTGAAC AGGCCGCTGC ATTTGGTCGT CATATTGGCA CAGCATTTCA GCTCATGGAT
GATTTGCTGG ATTACACCGC CAATGCTGCT CAAATGGGTA AAAACGCTGG CGATGATCTA
CGTGAAGGTA AGCCAACGCT TCCGTTAATT TATTTATTGG AAAACGGTAG CAATGAAGAG
CGTCTTTTAG TACGCGCTGC CATTGAACAA AATCAAGATT TACCAGAAGA CGTGTTCGCT
CAAATTTTAG GTGCTGTACA AAGTTCCGGC GCCCTCGACT ACACGCAGGC CGTCGCAAAA
CGAGAAGCTG ATTTAGCGTT AGATTGCATA AGTGAATTTC CAAGCAATGA GGCTACTACG
GCATTGCGTG ACTTGTGCAC CTACTCCCTC GCGCGACAAA CCTGA
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| Protein sequence | MTSTVKTNEL SQILAPISLE FKGLDEVIRL RLASKVALID QISTYIIQAG GKRVRPALLM
LVAKALANGK ESAHTLEMAA VVEFIHTATL LHDDVVDEST LRRGRETANA AFGNAASVLV
GDFLYSRAFQ MMVAPNDLRV MQILSDATNT IAEGEVLQLL NMNDPEVDEA SYLQVIRYKT
AKLFEASTEL GAILASATDS QREQAAAFGR HIGTAFQLMD DLLDYTANAA QMGKNAGDDL
REGKPTLPLI YLLENGSNEE RLLVRAAIEQ NQDLPEDVFA QILGAVQSSG ALDYTQAVAK
READLALDCI SEFPSNEATT ALRDLCTYSL ARQT
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