Gene Pnuc_0174 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_0174 
SymbollpxC 
ID5053123 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand+ 
Start bp170020 
End bp170934 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content45% 
IMG OID640470326 
ProductUDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 
Protein accessionYP_001154959 
Protein GI145588362 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0774] UDP-3-O-acyl-N-acetylglucosamine deacetylase 
TIGRFAM ID[TIGR00325] UDP-3-0-acyl N-acetylglucosamine deacetylase 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.00177271 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGAAGC AACGTACGAT CGCCGCACCA GTCAAGACTG TTGGTATTGG CTTGCATTCT 
GGCCGGAAGG TGACGATCGT GATCAAGCCT GCGCCTATCA ATTCAGGGGT GCAATTTGTG 
CGTATCGATA CGCCAGAGCA GTCTGTGGTG CCTGCAACAG CCTTAGCTGT ATGCGATACA 
CGCCTTGCAT CAGTGATACA AAAAGATGGT GTTCGTGTTT CTACAGTCGA GCATTTGCTT 
TCTGCTTGCG CTGGTTTGGG TTTAGATAAT CTTCTGATTG AGCTTGATGG TGAAGAAGTG 
CCCATCATGG ATGGAAGTGC GGCTTCTTTC TTATTTTTAA TTGAGTCTGC TGGCATCGCC 
GAACAAGAAG CCCCACGTCA GTTTGTTGTC ATTAAGAAAG CAGTTGAAGT ACGCGAAGGC 
GATAAGCTTG CGCGTCTAGA ACCTTTTTTT GGTTTCAAGT TGGACTTCAC GATTGACTTC 
AAGCATCCTG CGGTTGATAA AACTGGGCAA CGATTTATCG TAGATTTTGC AGAACACGCT 
TATCGTAGTG AAATTGGTCG AGCTAGAACA TTTGGTTTCG CGCATGAAGT CGAGGCGCTG 
AGAGAAATGG GTTTAGCGCG AGGCGGTAGT TTGGATAACG CAATTGTGCT CGATGAGCAT 
CGCATTCTCA ATAACGAAGA ACTTCGTTAT GAAGATGAAT TTGTTCGCCA TAAAATTCTT 
GATGCAATTG GCGATCTATA TTTAATTGGC CATCCTATTG TGGGTGCTTA TATTGCAGAA 
AAATCTGGCC ATGCTCTAAA TAACGCTCTA TTGCGTAAAT TGCTGGATGA TCCAAGTACT 
TATGAAATCA GCTCATTTGC TGAAAATAAG GCGCCGGCAG CCTATTCCCA AGAAAATCAG 
CCACTTTTCT TCTAA
 
Protein sequence
MMKQRTIAAP VKTVGIGLHS GRKVTIVIKP APINSGVQFV RIDTPEQSVV PATALAVCDT 
RLASVIQKDG VRVSTVEHLL SACAGLGLDN LLIELDGEEV PIMDGSAASF LFLIESAGIA 
EQEAPRQFVV IKKAVEVREG DKLARLEPFF GFKLDFTIDF KHPAVDKTGQ RFIVDFAEHA 
YRSEIGRART FGFAHEVEAL REMGLARGGS LDNAIVLDEH RILNNEELRY EDEFVRHKIL 
DAIGDLYLIG HPIVGAYIAE KSGHALNNAL LRKLLDDPST YEISSFAENK APAAYSQENQ 
PLFF