| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_0171 |
|---|
| Symbol | |
|---|
| ID | 5052183 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009379 |
|---|
| Strand | + |
|---|
| Start bp | 166757 |
|---|
| End bp | 167986 |
|---|
| Gene Length | 1230 bp |
|---|
| Protein Length | 409 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 640470323 |
|---|
| Product | cell division protein FtsA |
|---|
| Protein accession | YP_001154956 |
|---|
| Protein GI | 145588359 |
|---|
| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
|---|
| COG ID | [COG0849] Actin-like ATPase involved in cell division |
|---|
| TIGRFAM ID | [TIGR01174] cell division protein FtsA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.0000130276 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTAAAG ACAATCGTGA CCTATTGGTC GGTTTAGATA TTGGAACCTC TAAGGTCGTT
GCCTTGGTTG CCGAATTGGC TCCTGATGGC CAATTTAATG TGGTGGGCGT TGGTCAAACC
GCATCTAAGG GTTTGAAGAA GGGTGTTGTA GTCAATATTG AAGCAACTGT TCAATCGATT
CAGAAGGCGC TAGAAGAAGC TGAAATCATG GCAGATCGCC AGATTATGCA AGTCTTTACT
GGCATTGCTG GTAATCACAT TGTGAGCTTT AACTCGAGCG GAATGGTCGC TATTCGTGAT
AAAGAAGTCA GCGCTGGGGA TGTAGAGCGC GTACTTGAAA CTGCTAAAGC CATCAATATT
CCAACTGACC AACAAATTCT GCATATCTTG GTTCAAGAAT TCATCATCGA CGGGCAAGAA
GATGTGCGTG AGCCTATTGG TATGAGTGGT TTGCGCTTAG AGGTAAAGGT GCATATTGTC
ACGGGAGCTG TCAGTGCTGC GCAAAATATT GTGAAGTGTG TACGTCGCTG TGGACTAGAG
GTGAATGATC TTATTTTGCA ACCGCTGGCT TCTAGCTTGG CAGTATTGAC TGATGATGAA
AAAGAACTAG GTGTTGTTCT GGTAGATATT GGTGGTGGTA CTACAGATAT CGCAATTTAT
TGCCAGGGAT CTATTCGCCA CACCGCAGTG ATTCCAATTG CGGGCGATCA AGTTACCAAT
GACATTGCTA TGGCATTGCG CACCCCAACC ATTGATGCAG AAGATTTAAA GATTGCACAT
GGTATTGCGC GTCAGGAAAT GGCTGATCCA ACAACCATGA TTGATGTGCC GGGTGTGGGT
GATCGTGAGC CACGTCCAAT GTCTAAACAA GCGCTAGCTG CAGTGATTGA GCCACGTGTA
GAAGAGCTGT TTACTTTAGT TAGAGGGGTT GTTCGTGATT CAGGATACGA AGACATGGTC
TCTTCTGGAA TCGTGCTGAC TGGCGGCACT TCTTTAATGC CGGGCATGGT GGAGTTGGCA
GAACAAGTCT TCTTAAGGCC TGCCCGGATT GGTGTGCCTG AATACCGTGG ACATTTACAT
GAAGTTTTGC GTAGCCCGCG ATTTGCTACC AGTATCGGTT TGTTAATGGA GGGCCAGGCA
CAGTTATTGC GTGGTCGCCG AGTATCTCAG TCAGGCGCAT TGCAGGGTGT TATCTCGCGC
ATGAAGGAAT GGTTTGCAGG AAATTTTTAA
|
|---|
| Protein sequence | MSKDNRDLLV GLDIGTSKVV ALVAELAPDG QFNVVGVGQT ASKGLKKGVV VNIEATVQSI
QKALEEAEIM ADRQIMQVFT GIAGNHIVSF NSSGMVAIRD KEVSAGDVER VLETAKAINI
PTDQQILHIL VQEFIIDGQE DVREPIGMSG LRLEVKVHIV TGAVSAAQNI VKCVRRCGLE
VNDLILQPLA SSLAVLTDDE KELGVVLVDI GGGTTDIAIY CQGSIRHTAV IPIAGDQVTN
DIAMALRTPT IDAEDLKIAH GIARQEMADP TTMIDVPGVG DREPRPMSKQ ALAAVIEPRV
EELFTLVRGV VRDSGYEDMV SSGIVLTGGT SLMPGMVELA EQVFLRPARI GVPEYRGHLH
EVLRSPRFAT SIGLLMEGQA QLLRGRRVSQ SGALQGVISR MKEWFAGNF
|
|---|
| |