| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_0142 |
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| Symbol | |
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| ID | 5052220 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | + |
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| Start bp | 136800 |
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| End bp | 137894 |
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| Gene Length | 1095 bp |
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| Protein Length | 364 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640470294 |
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| Product | GTP-binding protein YchF |
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| Protein accession | YP_001154927 |
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| Protein GI | 145588330 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0012] Predicted GTPase, probable translation factor |
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| TIGRFAM ID | [TIGR00092] GTP-binding protein YchF |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.400282 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTTTGA AATGTGGCAT CGTCGGCCTG CCTAACGTCG GCAAATCTAC CCTCTTTAAT
GCGCTTACCA AGGCTGGAAT CGCAGCGGAA AACTATCCTT TCTGCACGAT TGAGCCTAAT
GTGGGCGTAG TAGAGGTTCC TGACCCCCGT CTAGCCGCTT TGGCTGAGAT CGTAAAGCCT
GAGCGCGTGC TGCCGGCAGC AGTCGAATTT GTCGATATTG CTGGCCTGGT TGCTGGCGCA
TCTAAAGGCG AAGGCTTAGG AAATCAATTC TTAGCCAATA TCCGGGAAAC GGATGCGATT
ACCCATGTGG TGCGTTGTTT CGAGGATCCA AACGTCATTC ACGTGGCAGG CAAAATCGAC
CCGATTGCTG ATATTGGTGT GATTGATACT GAGCTGGCCT TGTCTGACTT AGCCACAGTA
GAAAAAACAT TAAACCGTTC TAGCAAAGCT GCCAAATCTG GAAATGACAA AGAAGCGGCT
GCTTTAGTTG CAGTATTGAC TAAAGTACAA GCTCACCTTG ATTCAGCTTT GCCAGTGCGC
AGCATGAATT TAACTGATGA TGAGAAATTA CTCATTAAGC CCCTATGCTT AATTACTGCC
AAACCTGCTA TGTATGTGGC AAACGTTAAA GAAGATGGAT TTGAAAATAA TCCGCATCTT
GAAGCGGTGA AGCAGCACGC GGCAAAAGAA AATGCGCCGG TAGTCGCAGT ATGCGCAGCC
ATCGAAGCAG AAATTGCAGA TCTTGATGAT GTAGATAAAA CAGAATTTTT GGCTGACCTC
GGGATGGCTG AGCCTGGCTT GGATCGCGTC ATTCGTGCAG GCTATGCTTT ATTGGGCCTA
CACACTTACT TTACTGCTGG GGTTAAGGAA GTGCGCGCAT GGACCATTCA CCAAGGGGAT
ACAGCTCCGC AGGCAGCCGG GGTAATCCAC ACCGACTTTG AGCGCGGCTT TATTCGAGCG
CAAACAATTG CCTATGATGA CTTTATTCAA TTTAAAGGTG AGTCTGGAGC CAAAGAAGCT
GGCAAGATGC GCGCTGAAGG TAAGGAATAT GTCGTTAAAG ATGGCGATGT ATTGAACTTC
TTGTTTAACG TTTAA
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| Protein sequence | MSLKCGIVGL PNVGKSTLFN ALTKAGIAAE NYPFCTIEPN VGVVEVPDPR LAALAEIVKP
ERVLPAAVEF VDIAGLVAGA SKGEGLGNQF LANIRETDAI THVVRCFEDP NVIHVAGKID
PIADIGVIDT ELALSDLATV EKTLNRSSKA AKSGNDKEAA ALVAVLTKVQ AHLDSALPVR
SMNLTDDEKL LIKPLCLITA KPAMYVANVK EDGFENNPHL EAVKQHAAKE NAPVVAVCAA
IEAEIADLDD VDKTEFLADL GMAEPGLDRV IRAGYALLGL HTYFTAGVKE VRAWTIHQGD
TAPQAAGVIH TDFERGFIRA QTIAYDDFIQ FKGESGAKEA GKMRAEGKEY VVKDGDVLNF
LFNV
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