Gene Pnuc_0140 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_0140 
Symbol 
ID5051904 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand
Start bp134779 
End bp135492 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content41% 
IMG OID640470292 
Productputative thiol:disulfide interchange protein 
Protein accessionYP_001154925 
Protein GI145588328 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1651] Protein-disulfide isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.303259 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGATTAAAT TTTTATCAGC AGTACTAATA TGCGTAGGTC TCATATGCTC GACATCCGTT 
CAAGCACAAG CTGAACAGCA AATTAAGGTC GATATTCAAA AAAAATTGGG CACTACTGTC
AAGGTAAAAA GTGTTCATCC TGCACCCATT TCAGGCCTCT ATGAAGTGTT GGTTGGAAAT
GACATTTTTT ATACCGACGC CTCTGGAAAA TATTTATTCC AAGGTGAAAT CATTGAGCTC
GCTACTGGTA AAAACATTAC AGAGCAGCGT CAAAATGACC TTAATCGCAT TAAATGGTCT
GATTTAAACC AATCTAACGC CTTTAAAACA GTTCGAGGCA ACGGCAGTCG ACAGCTGGCA
ATTTTTTCTG ACCCTAATTG CGGTTACTGC AAGCGCCTTG AGAAATCTTT ACAGCAGCTA
GATAACATCA CCATCTATAC GTATCTCATA CCCATTCTTT CGCCTGACTC CGCTCAAAAA
GCAAAGCAAA TCTGGTGCTC TGCTGACCCG TCGAAGACGT ATATCGATTG GATGGTCAAT
GGAGTTACCC CAAATGGAAA AAGTGATTGC ACAACACCCT TAGATAAGAA TCTGGCATTT
GCAAAGACTT ACGGCATTAC TGGTACCCCT ACACTCTTTT TTATTGATGG CAGTCGCTTT
CCAGGCGCAG TACAAATTAC TGACATCGAA AAGAAATTCG GCTCACTTAA ATAA
 
Protein sequence
MIKFLSAVLI CVGLICSTSV QAQAEQQIKV DIQKKLGTTV KVKSVHPAPI SGLYEVLVGN 
DIFYTDASGK YLFQGEIIEL ATGKNITEQR QNDLNRIKWS DLNQSNAFKT VRGNGSRQLA
IFSDPNCGYC KRLEKSLQQL DNITIYTYLI PILSPDSAQK AKQIWCSADP SKTYIDWMVN
GVTPNGKSDC TTPLDKNLAF AKTYGITGTP TLFFIDGSRF PGAVQITDIE KKFGSLK