| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_0136 |
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| Symbol | prfA |
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| ID | 5052119 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | - |
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| Start bp | 129527 |
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| End bp | 130606 |
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| Gene Length | 1080 bp |
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| Protein Length | 359 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640470288 |
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| Product | peptide chain release factor 1 |
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| Protein accession | YP_001154921 |
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| Protein GI | 145588324 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0216] Protein chain release factor A |
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| TIGRFAM ID | [TIGR00019] peptide chain release factor 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.056338 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCCCA GCATGCGGGC TAAGCTAGAC CACCTAGATA CGCGCTTAGC CGAACTCAAT
TCCCTATTAA CTTCCGAAGA AGCAACCAAA GATATGGATG CTTATCGGAA ACTCACGCGT
GAGCATTCGG ATATTGCAAC GGTTGTGGAG CAGTTTGGCT TATATAAAAA AGCTGAAGCA
GATGCCCAAG CAGCCGAAGA AATGCGCAAA GATCCGGAAA TGAAGGATTT TGCTGATGAA
GAACAAAAAC AAGCTCAAGC TACGATGGAA GAGCTTGAGG GCGCACTTCA GAAGCTCCTT
CTACCAAAAG ATGTAAACGA TGAACGAAAC GTTTTCCTAG AAATTCGTGC GGGCACTGGT
GGTGATGAAA GCGCACTCTT TGCTGGCGAC CTGTTGCGGA TGTACACCCG CTTCGCCGAA
AGACAAGGTT GGAAGGTTGA AGTGGTTAAT GCAGCTGAAT CTGATCTGGG CGGCTATAAA
GAGGTTGTCT TGCGTCTTGT TGGGCAGTCA GTCTATTCAC GTCTAAAGTT TGAATCTGGC
GGTCACCGCG TTCAACGAGT TCCCCAAACT GAAACGCAAG GGCGTATCCA TACTTCAGCC
TGCACGGTAG CGGTCATGCC CGAAGCAGAT GAACTTGAAG CAGTGAAAAT TAATCCGGCA
GAACTACGTA TTGATACCTT CCGCGCCTCT GGTGCAGGGG GACAGCACAT TAATAAAACC
GATTCTGCCG TACGTATCAC CCACATCCCG ACCGGTACGG TAGTAGAGTG CCAAGATGAT
CGTAGCCAAC ACCGCAATCG CGAACAAGCA ATGAAGGTAT TGGTATCGCG CATCATGGAT
GCTCGCGAGC GAGAGAAGCA TCAGTTAGAG GCCCAGACCA GAAAATCATT GATTGGCTCT
GGTGATCGCA GCGATCGCAT TAGAACCTAC AACTTCCCAC AAGGACGTAT TACTGATCAC
CGCATTAACC TCACTCTGTA TAAAATTGAT GCCATGATGG ATGGGGATAT TGATGATCTG
TGCAATGCTT TAGCATCTGA ACATCAAGCC GAATTGCTCG CCGCACTAGG CGATAGCTAA
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| Protein sequence | MKPSMRAKLD HLDTRLAELN SLLTSEEATK DMDAYRKLTR EHSDIATVVE QFGLYKKAEA
DAQAAEEMRK DPEMKDFADE EQKQAQATME ELEGALQKLL LPKDVNDERN VFLEIRAGTG
GDESALFAGD LLRMYTRFAE RQGWKVEVVN AAESDLGGYK EVVLRLVGQS VYSRLKFESG
GHRVQRVPQT ETQGRIHTSA CTVAVMPEAD ELEAVKINPA ELRIDTFRAS GAGGQHINKT
DSAVRITHIP TGTVVECQDD RSQHRNREQA MKVLVSRIMD AREREKHQLE AQTRKSLIGS
GDRSDRIRTY NFPQGRITDH RINLTLYKID AMMDGDIDDL CNALASEHQA ELLAALGDS
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