| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_0112 |
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| Symbol | |
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| ID | 5052890 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | + |
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| Start bp | 107338 |
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| End bp | 108096 |
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| Gene Length | 759 bp |
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| Protein Length | 252 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640470264 |
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| Product | imidazole glycerol phosphate synthase subunit HisF |
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| Protein accession | YP_001154898 |
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| Protein GI | 145588301 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0107] Imidazoleglycerol-phosphate synthase |
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| TIGRFAM ID | [TIGR00735] imidazoleglycerol phosphate synthase, cyclase subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.203199 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCTCACAA AACGAATTAT TCCTTGCCTG GATGTTACTG CTGGGCGCGT GGTTAAGGGT
GTGAACTTTG TCGGCCTGCG TGATGCAGGT GATCCCGTTG AGATTGCTCG TCGTTACGAT
TCTCAAGGCG CGGACGAGCT GACCTTTTTA GATATCACAG CTACTTCTGA TGGTCGCGAT
CTAATTTTGC ACATCATCGA AAATGTAGCA TCACAAGTAT TTATTCCCCT CACGGTTGGC
GGCGGTGTAC GTGCGGTTGC GGACGTAAGG CGCTTACTCA ATGCAGGCGC TGACAAGGTC
AGCATGAATT CATCAGCTGT CGCAAACCCA GATTTAGTGT CAGATGCTGC CGCTTATTAC
GGCTCACAAT GCATCGTGGT TGCGATTGAT GCCAAACAAA CTGAGGCTGG CAATTGGGAG
GTCTTTACCC ATGGAGGCAG AACTGCCACA GGTATGGATG TTGTGGAGTG GGCCAAAGAA
GTTGCTAAAC GTGGTGCTGG TGAAATATTA CTAACGAGCA TGAATCGTGA CGGTAGTAAG
GATGGTTTTG ATTTGGCACT CACAGCAGCA GTAAGTGACG CTGTGTCGGT GCCGGTGATT
GCCTCCGGTG GGGTAGGCAA TCTTCAGCAC TTAGTGGATG GCATTACCAA GGGCCACGCT
GATGCGGTAT TGGCAGCCAG TATTTTTCAC TACGGTGAAT ATACGGTCCA GGAGGCAAAA
GAATATATGG CTGCCCAAGG GGTTCCCGTT CGAATTTAA
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| Protein sequence | MLTKRIIPCL DVTAGRVVKG VNFVGLRDAG DPVEIARRYD SQGADELTFL DITATSDGRD
LILHIIENVA SQVFIPLTVG GGVRAVADVR RLLNAGADKV SMNSSAVANP DLVSDAAAYY
GSQCIVVAID AKQTEAGNWE VFTHGGRTAT GMDVVEWAKE VAKRGAGEIL LTSMNRDGSK
DGFDLALTAA VSDAVSVPVI ASGGVGNLQH LVDGITKGHA DAVLAASIFH YGEYTVQEAK
EYMAAQGVPV RI
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