Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnuc_0099 |
Symbol | |
ID | 5053279 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
Kingdom | Bacteria |
Replicon accession | NC_009379 |
Strand | + |
Start bp | 97204 |
End bp | 97962 |
Gene Length | 759 bp |
Protein Length | 252 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640470251 |
Product | VacJ family lipoprotein |
Protein accession | YP_001154885 |
Protein GI | 145588288 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2853] Surface lipoprotein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.630225 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTGCATT TAGGCAGACT TCGCCGAACA GGGGTGCGTT TCCTGTTAGT GGGGTTTACT GCTCTGATTG TTGGTTGCGC TTCGATACCC GCTGGCGTCG AGCCCTCACC TAATGATCCG TGGGAGCCTT TTAATCGCTC AGTTTTCGAA TTTAACGAAG GTTTAGATGC GTATTTACTC AAGCCCGTAG TAGCTGGGTA CCGTTTTGTT TTGCCAGAAT TTATTCGCGA GGGAATCTAT AACTTTTTTA GTAATTACAA CGATATATAT ACGGCTCTGT ATAACTTGCT GCAAGGTAAG CCTGGATATG CCTTTAATGA CTTGATGCGA GTTGCAGTAA ATACCACTAT GGGCTTAGGG GGTCTTCTAG ATCTTGCAAC CCCTGGTGGC CTTGAAAAGC ATAAAGAAGA CTGGGGTCAG ACTTTGGGTG TATGGGGTGT ACCTGCAGGC CCATATGTAG TATTACCTTT TTTTGGCCCA AGCAATGTGC GCGATACCTT TGGCACTGCT GCTGATTTAG AGTCAGACTA CTTATTTAGA TTGCTACCAA ACGTAGCTCT TAGAAATAGT TTGACTGGCT TGCGTGTTGT GAATACCCGA AACACCTATT ACGAGGCAGG TGACTTATTG GATGGCGCCG CTATTGATAA GTACAGCTTT ATGCGGGATG CTTACATTCA AAGACGTCAG TACCAAATCA ATGAGGGTAG AGACGATGAA GAGCCTCCAA TGCCCCCGTA TGAGAATGGT TACGAGTAA
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Protein sequence | MLHLGRLRRT GVRFLLVGFT ALIVGCASIP AGVEPSPNDP WEPFNRSVFE FNEGLDAYLL KPVVAGYRFV LPEFIREGIY NFFSNYNDIY TALYNLLQGK PGYAFNDLMR VAVNTTMGLG GLLDLATPGG LEKHKEDWGQ TLGVWGVPAG PYVVLPFFGP SNVRDTFGTA ADLESDYLFR LLPNVALRNS LTGLRVVNTR NTYYEAGDLL DGAAIDKYSF MRDAYIQRRQ YQINEGRDDE EPPMPPYENG YE
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