Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnuc_0098 |
Symbol | |
ID | 5053398 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
Kingdom | Bacteria |
Replicon accession | NC_009379 |
Strand | + |
Start bp | 96722 |
End bp | 97204 |
Gene Length | 483 bp |
Protein Length | 160 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 640470250 |
Product | hypothetical protein |
Protein accession | YP_001154884 |
Protein GI | 145588287 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1463] ABC-type transport system involved in resistance to organic solvents, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.334829 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGAAAAA GTGCAATTGA TATTTGGGTA GGAATTTTTG TTGCCATTGG TTTATTGGCC GCCTTATTTC TTGCGTTGAA AGTAGGCAAT ATGAATGCGG TATCTTTTGC GCCTACATAT AAGATCACAG CCCGCTTCGA TAATATTGGT GGCTTGAAGC CTCGCGCTCC CGTAAAGAGC GCTGGGGTAG TAGTGGGGCG TATCGCTAAT ATTTCATTTG ATGATAAAAC TTACCAAGCT ACTGTTGTGA TGACGATTGA AGATGCTTAT AGGTTTCCAA AAGATTCTTC AGCGAAAATT TTGACTTCTG GTTTGTTGGG AGAGCAATAC ATTGGCTTAG AAGCTGGTGG CTCAGATGAT ATGCTGGCTG AGGGTGGGAA AATTACCCAA ACCCAATCAG CCATTGTTTT GGAGAGTTTG ATTAGCCAGT TCTTGTATAA CAAGGCGGCA GATAGCGGGC AAGAAAAAGG TGCTGCTAAA TGA
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Protein sequence | MRKSAIDIWV GIFVAIGLLA ALFLALKVGN MNAVSFAPTY KITARFDNIG GLKPRAPVKS AGVVVGRIAN ISFDDKTYQA TVVMTIEDAY RFPKDSSAKI LTSGLLGEQY IGLEAGGSDD MLAEGGKITQ TQSAIVLESL ISQFLYNKAA DSGQEKGAAK
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