Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnuc_0095 |
Symbol | |
ID | 5053323 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
Kingdom | Bacteria |
Replicon accession | NC_009379 |
Strand | + |
Start bp | 93581 |
End bp | 95044 |
Gene Length | 1464 bp |
Protein Length | 487 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640470247 |
Product | glutamate synthase, NADH/NADPH, small subunit |
Protein accession | YP_001154881 |
Protein GI | 145588284 |
COG category | [E] Amino acid transport and metabolism [R] General function prediction only |
COG ID | [COG0493] NADPH-dependent glutamate synthase beta chain and related oxidoreductases |
TIGRFAM ID | [TIGR01317] glutamate synthases, NADH/NADPH, small subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.440417 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGTAAGG TCACTGGATT TATGGAGTTT GAGCGTGTCG ATGAAACATA CGAAGCGCCC GTCAAACGTC TCCACCATTA CAAAGAATTC GTAGCCGCAC TAACTGATGA AGAGGCAAAA GTTCAGGGTG CGCGTTGCAT GGACTGCGGC ATTCCATTTT GTAATAACGG TTGCCCTGTC AATAACATCA TTCCCGATTT CAATGATTTA GTTTTTCATA ATGATTGGAA GAATGCGTTA GATGTACTGC AATCTACGAA TAACTTCCCT GAGTTCACTG GCCGTATTTG TCCTGCTCCT TGTGAAGCTG CCTGTACCTT AGGCATTAAC CGTGCGCCAG TGGGCATCAA GTCGATTGAG CACGCGATCA TTGATAAGGG TTGGGAAAGT GGCTGGGTTA AGCCGCAGCC ATCTAAAAGC AAAACAGGTA AAAAAGTGGC TGTTGTCGGC GGTGGCCCAG CAGGCATGGC TGCAGCACAA CAGTTGGCGC GTGTTGGCCA TGACGTCACT GTCTATGAAA AGAATGATCG TATCGGCGGA TTGCTGCGCT ATGGTATTCC TGATTTCAAA ATGGAAAAGT GGCTCATCGA TCGCCGTGTA GAGCAAATGC AGGCCGAAGG TGTGAAATTT GAAACTGGCA TTTTTGTTGG AAAAGAAGTG CTTGGTGTAG AGGTAAAAAA TTATTCCAAG AAGACCGTGT CCCCTGAACA GTTGATGAAA GATTTTGATG CTGTTGTTAT TACGGGTGGC GCTGAGCAAC CACGTGATCT TCCGGTGCCG GGTCGCGAAT TGTCAGGAGT TCACTACGCT TTAGAGTTTT TAATTCCCCA AAACAAAGAG AATGCTGGCG ATTTTAAAAA TGAAATCCGC GCAACAGATA AACATGTTGT CGTGATTGGT GGTGGTGATA CAGGATCTGA TTGTGTTGGA ACATCGAATC GTCATGGCGC AACCAAGATT ACCCAATTTG AGTTATTGCC CCAGCCACCC GAAGAAGAAA ACAAGCCTCT GGTTTGGCCT TATTGGCCAA CGAAGTTACG TACTTCCTCA TCTCATGAAG AAGGTTGTGA TCGCGATTGG TCTGTTGGAA CCAAACGTTT CGAAGGTAAA AATGGCAAAG TTGAAAAACT AATTGGCGTT CGTTTGGAGT GGAAAGACGG CAAGATGGCA GAAGTGCCAA ACTCAGAATT TGAAATAAAG GCAGATTTAG TGCTTTTGGC AATGGGATTT GTATCCCCAG TTCAACAAGT ATTAAACGCA TTTGGCGTAG AAAAAGACGC ACGCGGTAAT GCAAAAGCGA CTGTAGACGG TCAAAATGCC TATCAAACCA ATGTTTCTAA GGTATTTGCT GCTGGTGACA TGCGTCGTGG TCAATCTTTG GTTGTTTGGG CAATACGTGA AGGCCGTCAA TGTGCCCGCG CAGTAGATGA GTATTTAATG GGGTCTTCCG TTTTGCCCCG ATAA
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Protein sequence | MGKVTGFMEF ERVDETYEAP VKRLHHYKEF VAALTDEEAK VQGARCMDCG IPFCNNGCPV NNIIPDFNDL VFHNDWKNAL DVLQSTNNFP EFTGRICPAP CEAACTLGIN RAPVGIKSIE HAIIDKGWES GWVKPQPSKS KTGKKVAVVG GGPAGMAAAQ QLARVGHDVT VYEKNDRIGG LLRYGIPDFK MEKWLIDRRV EQMQAEGVKF ETGIFVGKEV LGVEVKNYSK KTVSPEQLMK DFDAVVITGG AEQPRDLPVP GRELSGVHYA LEFLIPQNKE NAGDFKNEIR ATDKHVVVIG GGDTGSDCVG TSNRHGATKI TQFELLPQPP EEENKPLVWP YWPTKLRTSS SHEEGCDRDW SVGTKRFEGK NGKVEKLIGV RLEWKDGKMA EVPNSEFEIK ADLVLLAMGF VSPVQQVLNA FGVEKDARGN AKATVDGQNA YQTNVSKVFA AGDMRRGQSL VVWAIREGRQ CARAVDEYLM GSSVLPR
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