Gene Pnuc_0095 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_0095 
Symbol 
ID5053323 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand
Start bp93581 
End bp95044 
Gene Length1464 bp 
Protein Length487 aa 
Translation table11 
GC content46% 
IMG OID640470247 
Productglutamate synthase, NADH/NADPH, small subunit 
Protein accessionYP_001154881 
Protein GI145588284 
COG category[E] Amino acid transport and metabolism
[R] General function prediction only 
COG ID[COG0493] NADPH-dependent glutamate synthase beta chain and related oxidoreductases 
TIGRFAM ID[TIGR01317] glutamate synthases, NADH/NADPH, small subunit 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.440417 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGTAAGG TCACTGGATT TATGGAGTTT GAGCGTGTCG ATGAAACATA CGAAGCGCCC 
GTCAAACGTC TCCACCATTA CAAAGAATTC GTAGCCGCAC TAACTGATGA AGAGGCAAAA
GTTCAGGGTG CGCGTTGCAT GGACTGCGGC ATTCCATTTT GTAATAACGG TTGCCCTGTC
AATAACATCA TTCCCGATTT CAATGATTTA GTTTTTCATA ATGATTGGAA GAATGCGTTA
GATGTACTGC AATCTACGAA TAACTTCCCT GAGTTCACTG GCCGTATTTG TCCTGCTCCT
TGTGAAGCTG CCTGTACCTT AGGCATTAAC CGTGCGCCAG TGGGCATCAA GTCGATTGAG
CACGCGATCA TTGATAAGGG TTGGGAAAGT GGCTGGGTTA AGCCGCAGCC ATCTAAAAGC
AAAACAGGTA AAAAAGTGGC TGTTGTCGGC GGTGGCCCAG CAGGCATGGC TGCAGCACAA
CAGTTGGCGC GTGTTGGCCA TGACGTCACT GTCTATGAAA AGAATGATCG TATCGGCGGA
TTGCTGCGCT ATGGTATTCC TGATTTCAAA ATGGAAAAGT GGCTCATCGA TCGCCGTGTA
GAGCAAATGC AGGCCGAAGG TGTGAAATTT GAAACTGGCA TTTTTGTTGG AAAAGAAGTG
CTTGGTGTAG AGGTAAAAAA TTATTCCAAG AAGACCGTGT CCCCTGAACA GTTGATGAAA
GATTTTGATG CTGTTGTTAT TACGGGTGGC GCTGAGCAAC CACGTGATCT TCCGGTGCCG
GGTCGCGAAT TGTCAGGAGT TCACTACGCT TTAGAGTTTT TAATTCCCCA AAACAAAGAG
AATGCTGGCG ATTTTAAAAA TGAAATCCGC GCAACAGATA AACATGTTGT CGTGATTGGT
GGTGGTGATA CAGGATCTGA TTGTGTTGGA ACATCGAATC GTCATGGCGC AACCAAGATT
ACCCAATTTG AGTTATTGCC CCAGCCACCC GAAGAAGAAA ACAAGCCTCT GGTTTGGCCT
TATTGGCCAA CGAAGTTACG TACTTCCTCA TCTCATGAAG AAGGTTGTGA TCGCGATTGG
TCTGTTGGAA CCAAACGTTT CGAAGGTAAA AATGGCAAAG TTGAAAAACT AATTGGCGTT
CGTTTGGAGT GGAAAGACGG CAAGATGGCA GAAGTGCCAA ACTCAGAATT TGAAATAAAG
GCAGATTTAG TGCTTTTGGC AATGGGATTT GTATCCCCAG TTCAACAAGT ATTAAACGCA
TTTGGCGTAG AAAAAGACGC ACGCGGTAAT GCAAAAGCGA CTGTAGACGG TCAAAATGCC
TATCAAACCA ATGTTTCTAA GGTATTTGCT GCTGGTGACA TGCGTCGTGG TCAATCTTTG
GTTGTTTGGG CAATACGTGA AGGCCGTCAA TGTGCCCGCG CAGTAGATGA GTATTTAATG
GGGTCTTCCG TTTTGCCCCG ATAA
 
Protein sequence
MGKVTGFMEF ERVDETYEAP VKRLHHYKEF VAALTDEEAK VQGARCMDCG IPFCNNGCPV 
NNIIPDFNDL VFHNDWKNAL DVLQSTNNFP EFTGRICPAP CEAACTLGIN RAPVGIKSIE
HAIIDKGWES GWVKPQPSKS KTGKKVAVVG GGPAGMAAAQ QLARVGHDVT VYEKNDRIGG
LLRYGIPDFK MEKWLIDRRV EQMQAEGVKF ETGIFVGKEV LGVEVKNYSK KTVSPEQLMK
DFDAVVITGG AEQPRDLPVP GRELSGVHYA LEFLIPQNKE NAGDFKNEIR ATDKHVVVIG
GGDTGSDCVG TSNRHGATKI TQFELLPQPP EEENKPLVWP YWPTKLRTSS SHEEGCDRDW
SVGTKRFEGK NGKVEKLIGV RLEWKDGKMA EVPNSEFEIK ADLVLLAMGF VSPVQQVLNA
FGVEKDARGN AKATVDGQNA YQTNVSKVFA AGDMRRGQSL VVWAIREGRQ CARAVDEYLM
GSSVLPR