| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_0087 |
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| Symbol | |
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| ID | 5053582 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | + |
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| Start bp | 81571 |
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| End bp | 81951 |
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| Gene Length | 381 bp |
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| Protein Length | 126 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640470239 |
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| Product | frataxin family protein |
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| Protein accession | YP_001154873 |
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| Protein GI | 145588276 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1965] Protein implicated in iron transport, frataxin homolog |
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| TIGRFAM ID | [TIGR03421] iron donor protein CyaY |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAATCCAA ATAATTCAGC TGTAGAAACT ATTGACGATA AGCAGTTTTA CCAACTAGGA
AGCAATTTAT TGCATTCTAT TGAGGTGGCT CTAGAGTCTG CTGATGATGA GCTGGATCTT
GATCTAGACG TGGAACGTCA GGGGGGTAAC GTCATCAATA TTCGCTTTAG AGATAAAAGC
GTCATCGTGG TCAATACACA GCCCCCTCTG CATGAAATCT GGGTGGCAGC TAAGTCCGGC
GGTTATCACT ATCGCTGGGC CGGCACCTTG GCGCAACCTT TATGGCTAGA TACTAAAACC
GGCAAAGAAC TTCTCAGTGA TCTATCTGAG TTTGCGAGTA CGCAAGCCGG ACAGCCAATC
AAGATTGAGT TAATGAAATA A
|
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| Protein sequence | MNPNNSAVET IDDKQFYQLG SNLLHSIEVA LESADDELDL DLDVERQGGN VINIRFRDKS
VIVVNTQPPL HEIWVAAKSG GYHYRWAGTL AQPLWLDTKT GKELLSDLSE FASTQAGQPI
KIELMK
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