| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_0084 |
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| Symbol | engB |
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| ID | 5053728 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | - |
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| Start bp | 78421 |
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| End bp | 79086 |
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| Gene Length | 666 bp |
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| Protein Length | 221 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640470236 |
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| Product | ribosome biogenesis GTP-binding protein YsxC |
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| Protein accession | YP_001154870 |
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| Protein GI | 145588273 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0218] Predicted GTPase |
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| TIGRFAM ID | [TIGR03598] ribosome biogenesis GTP-binding protein YsxC/EngB |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCTAAAC TCTTTCAAGC CCGATTCGCC ACAACAGTCA ATGACACCCA TTGCCTACCT
GCCACTCCGC TGCGTGAGGT TGCCTTTGCT GGACGCTCAA ATGCGGGTAA ATCTAGCGCA
CTTAACGTCC TTTGCAACCA AAAAAGGCTC GCTTTTGCCA GTAAAACCCC AGGACGCACC
CAACATATTA ACTATTTTGG GATTTTTGCA AAAGATGATC TTTTGGCCTA TTTGGTGGAT
TTACCAGGCT ATGGCTACGC TGCGGTCAAT CATGAGACCA AATACCACTG GAATGCCCTT
CTAAGCGACT ATTTACAAGA GCGTGAGCAA CTGGTCGGCA TGGTTCTAAT TGTTGATGCC
AGGCGCGGCA TAACCGAACT AGACGAACAA ATGATTCAAT GGTTCGTGCC AACGGGCAAG
CCTATCCATA TATTGCTCAG CAAATGCGAC AAACTGAATA AAAGTGAGTG TAAGCATGCG
CTTGAGGATG TTCGCAAGCA ATTACAACAA TATGACCCTG CATTACCCGA TGGCACAGGC
GAATCTCAGC AGCTTACGGC ACAATTATTC TCCAGCACCA AGCGCATTGG TTTGGAAGAA
GCAGATAATT TAATTATTAA ATGGCTATTT GAAGCAGAAA CCCATGAAGA CGAAATCACC
AGCTAA
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| Protein sequence | MSKLFQARFA TTVNDTHCLP ATPLREVAFA GRSNAGKSSA LNVLCNQKRL AFASKTPGRT
QHINYFGIFA KDDLLAYLVD LPGYGYAAVN HETKYHWNAL LSDYLQEREQ LVGMVLIVDA
RRGITELDEQ MIQWFVPTGK PIHILLSKCD KLNKSECKHA LEDVRKQLQQ YDPALPDGTG
ESQQLTAQLF SSTKRIGLEE ADNLIIKWLF EAETHEDEIT S
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