Gene Pnuc_0080 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_0080 
Symbol 
ID5052909 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand
Start bp74907 
End bp75257 
Gene Length351 bp 
Protein Length116 aa 
Translation table11 
GC content48% 
IMG OID640470232 
ProductCutA1 divalent ion tolerance protein 
Protein accessionYP_001154866 
Protein GI145588269 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1324] Uncharacterized protein involved in tolerance to divalent cations 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCCAAA CCCCTCAAGA CAATTTAGAT GCCATGCTGC TGGTGATTAC AAGCCTGCCT 
AGTGTGGACA CGGCTAAAGC ACTGGCCAAG GATTTAATTG AGTCCCGCCT GGCTGCATGT
GTGCAGCTAC AGGAGGGTAT TCAGTCTCTG TACCGCTGGG AAGGCAAAAT TTGCGAAGCG
CAAGAGGTTC TTTTGTCCGC TAAAACGATG GCGACCAAAT GGGCTGAAAT CTCCGCTTTT
ATTCAAGATA AGCATCCATA CGAACTACCT GAGATCCTGG CTTTTTCCCC AGAGCAGTAT
GAATATCAGT ACGGCAAATG GGCGAAGTCT GAGGTAAATT CGAAGTCATG A
 
Protein sequence
MPQTPQDNLD AMLLVITSLP SVDTAKALAK DLIESRLAAC VQLQEGIQSL YRWEGKICEA 
QEVLLSAKTM ATKWAEISAF IQDKHPYELP EILAFSPEQY EYQYGKWAKS EVNSKS