Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnuc_0072 |
Symbol | rplO |
ID | 5052569 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
Kingdom | Bacteria |
Replicon accession | NC_009379 |
Strand | + |
Start bp | 69692 |
End bp | 70132 |
Gene Length | 441 bp |
Protein Length | 146 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640470224 |
Product | 50S ribosomal protein L15 |
Protein accession | YP_001154858 |
Protein GI | 145588261 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0200] Ribosomal protein L15 |
TIGRFAM ID | [TIGR01071] ribosomal protein L15, bacterial/organelle |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.461938 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAACTCA ATACACTCAA ACCCGCAGAG GGCTCCAAGA AAAACCGTCG TCGCGTAGGA CGCGGCATTG GTTCTGGTCT CGGTAAAACT GCTGGCCGTG GTCACAAAGG TCAAAAATCC CGTTCTGGTG GTTTCCACAA GGTTGGATTC GAAGGCGGTC AAATGCCTAT GTATCGTCGT TTGCCAAAAC GCGGTTTCGT GTCTATGACA CGTCGTCACG TTGGTCAAAT TACTTTAAAT GACTTAGCAA AAATCAACTT GCCAGAGGTG GACTTGTTGG TATTGAAAGC CCATGGTTTT GCTGGTGAGC AAATCAATGC AGTTAAGGTT ATCAAGACTG GTGAACTCAA GATTGCTGTA ACCCTCAAAG GCCTTACTGC AACTGCAGGC GCAAAAGCAG CTATTGAAGC TGCCGGCGGC AAATTGGTTG AATTGGCTTA A
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Protein sequence | MQLNTLKPAE GSKKNRRRVG RGIGSGLGKT AGRGHKGQKS RSGGFHKVGF EGGQMPMYRR LPKRGFVSMT RRHVGQITLN DLAKINLPEV DLLVLKAHGF AGEQINAVKV IKTGELKIAV TLKGLTATAG AKAAIEAAGG KLVELA
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