Gene Pnuc_0072 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_0072 
SymbolrplO 
ID5052569 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand
Start bp69692 
End bp70132 
Gene Length441 bp 
Protein Length146 aa 
Translation table11 
GC content47% 
IMG OID640470224 
Product50S ribosomal protein L15 
Protein accessionYP_001154858 
Protein GI145588261 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0200] Ribosomal protein L15 
TIGRFAM ID[TIGR01071] ribosomal protein L15, bacterial/organelle 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.461938 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAACTCA ATACACTCAA ACCCGCAGAG GGCTCCAAGA AAAACCGTCG TCGCGTAGGA 
CGCGGCATTG GTTCTGGTCT CGGTAAAACT GCTGGCCGTG GTCACAAAGG TCAAAAATCC
CGTTCTGGTG GTTTCCACAA GGTTGGATTC GAAGGCGGTC AAATGCCTAT GTATCGTCGT
TTGCCAAAAC GCGGTTTCGT GTCTATGACA CGTCGTCACG TTGGTCAAAT TACTTTAAAT
GACTTAGCAA AAATCAACTT GCCAGAGGTG GACTTGTTGG TATTGAAAGC CCATGGTTTT
GCTGGTGAGC AAATCAATGC AGTTAAGGTT ATCAAGACTG GTGAACTCAA GATTGCTGTA
ACCCTCAAAG GCCTTACTGC AACTGCAGGC GCAAAAGCAG CTATTGAAGC TGCCGGCGGC
AAATTGGTTG AATTGGCTTA A
 
Protein sequence
MQLNTLKPAE GSKKNRRRVG RGIGSGLGKT AGRGHKGQKS RSGGFHKVGF EGGQMPMYRR 
LPKRGFVSMT RRHVGQITLN DLAKINLPEV DLLVLKAHGF AGEQINAVKV IKTGELKIAV
TLKGLTATAG AKAAIEAAGG KLVELA