| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_0052 |
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| Symbol | rpsJ |
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| ID | 5053003 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | + |
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| Start bp | 60518 |
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| End bp | 60829 |
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| Gene Length | 312 bp |
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| Protein Length | 103 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640470204 |
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| Product | 30S ribosomal protein S10 |
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| Protein accession | YP_001154838 |
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| Protein GI | 145588241 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0051] Ribosomal protein S10 |
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| TIGRFAM ID | [TIGR01049] ribosomal protein S10, bacterial/organelle |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000000000149229 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCAAAACC AAAAAATTCG TATTCGCCTT AAAGCATTTG ATTACCGTTT AATCGACCAG
TCTGCAGCTG AAATCGTTGA TACAGCTAAG CGCACTGGTG CAGTTGTTAA GGGTCCAGTA
CCTTTGCCAA CACGTATTGA GCGCTTTGAT ATCTTGCGTT CACCACACGT AAACAAGACA
TCTCGTGATC AGTTAGAGAT CCGTACCCAT CTCCGTTTGA TGGATATCGT TGATCCTACA
GAGAAAACTG TAGATGCTTT GATGAAATTA GACCTTCCAG CAGGCGTGGA TGTCGAAATT
AAGTTGCAGT AA
|
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| Protein sequence | MQNQKIRIRL KAFDYRLIDQ SAAEIVDTAK RTGAVVKGPV PLPTRIERFD ILRSPHVNKT
SRDQLEIRTH LRLMDIVDPT EKTVDALMKL DLPAGVDVEI KLQ
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