Gene Pnuc_0048 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_0048 
SymbolrpsL 
ID5053681 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand
Start bp56013 
End bp56393 
Gene Length381 bp 
Protein Length126 aa 
Translation table11 
GC content46% 
IMG OID640470200 
Product30S ribosomal protein S12 
Protein accessionYP_001154834 
Protein GI145588237 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0048] Ribosomal protein S12 
TIGRFAM ID[TIGR00981] ribosomal protein S12, bacterial/organelle 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000042248 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCAACAA TTAATCAATT AATACGCAAG CCAAGATCCA GGCTTATCGT TAAAAGCAAG 
AGCCCTGCAC TGGAAAACAG TCCGCAGCGC CGTGGTGTAT GTACACGTGT GTACACAACC
ACTCCTAAAA AGCCTAACTC TGCGCTGCGT AAAGTAGCCA AAGTACGCTT AACCAATGGT
TTTGAAGTGA TTTCATACAT TGGTGGTGAA GGCCATAACC TCCAGGAACA CTCAGTAGTG
TTGATCCGTG GTGGTCGTGT AAAGGATTTG CCAGGTGTTC GTTATCACAT CGTTCGTGGC
TCACTTGACT TGCAAGGTGT TAAAGACCGT AAGCAATCAC GTTCCAAGTA CGGTGCTAAG
CGCGCTAAGA AAGCTGCTTA A
 
Protein sequence
MPTINQLIRK PRSRLIVKSK SPALENSPQR RGVCTRVYTT TPKKPNSALR KVAKVRLTNG 
FEVISYIGGE GHNLQEHSVV LIRGGRVKDL PGVRYHIVRG SLDLQGVKDR KQSRSKYGAK
RAKKAA