| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_0044 |
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| Symbol | rplJ |
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| ID | 5052723 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | + |
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| Start bp | 46186 |
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| End bp | 46833 |
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| Gene Length | 648 bp |
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| Protein Length | 215 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640470196 |
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| Product | 50S ribosomal protein L10 |
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| Protein accession | YP_001154830 |
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| Protein GI | 145588233 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0244] Ribosomal protein L10 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.000127438 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGCCTTTGA ATGTACAAGA CAAAAAAGCG ATTGTTGCTG ATGTCGGCGC TCAATTGGCT
GGAGCCCAAA CTGTTGTGCT CGCTGAATAC CGTGGTATTC CAGTAGAGCA GTTGACAAAG
CTACGTGCTA GCGCACGTGA CCAAGGTGTA TATCTTCGCG TTTTGAAGAA CACATTGGCA
CGCCGTGCTG CACAAGGCAC ACAGTTTGAG CCTCTTGCTG ATTCGATGGT TGGCCCCTTG
ATCTATGGCA TCTCTGCTGA TCCGATTGCT TCGGCAAAAG TATTGCAGAA CTTTGCTAAG
ACTCAAGACA AGCTGGTCAT TACTGCTGGC TTATATAACG GCAAGTTGTT GGACGTAGCG
GGCGTTAAAT CCCTCGCGTC TATTCCAAGC CGCGACGAGT TGTTATCTCA GTTATTGGGC
GTCATGTTGG CCCCAGTTTC TGCTATGGCT CGCGTATTGG GCGCAGTAGC AGCACAGAAA
GCCGCAGGAG CACCTGCTCC AGTAGCTGAA GTGGCAGCAC CTGCAGCAGA AGCAGCAGCC
CCAGCAGAAG TAGTTGCTGA AGCCGCAGCT CCTGAAGTAG CCGCTGAGCC TGCAGCCGCA
GCCCCAGAAG CTGGAACAGA AGCAAAAGAA ACCCCTGCCG CTGAATAA
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| Protein sequence | MPLNVQDKKA IVADVGAQLA GAQTVVLAEY RGIPVEQLTK LRASARDQGV YLRVLKNTLA
RRAAQGTQFE PLADSMVGPL IYGISADPIA SAKVLQNFAK TQDKLVITAG LYNGKLLDVA
GVKSLASIPS RDELLSQLLG VMLAPVSAMA RVLGAVAAQK AAGAPAPVAE VAAPAAEAAA
PAEVVAEAAA PEVAAEPAAA APEAGTEAKE TPAAE
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