Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnuc_0042 |
Symbol | rplK |
ID | 5052717 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
Kingdom | Bacteria |
Replicon accession | NC_009379 |
Strand | + |
Start bp | 44813 |
End bp | 45244 |
Gene Length | 432 bp |
Protein Length | 143 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640470194 |
Product | 50S ribosomal protein L11 |
Protein accession | YP_001154828 |
Protein GI | 145588231 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0080] Ribosomal protein L11 |
TIGRFAM ID | [TIGR01632] 50S ribosomal protein L11 |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.000000150349 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAAAGA AGATTATTGG CTTTATTAAG CTGCAGATCC CTGCAGGTAA AGCAAATCCA TCACCACCGG TAGGTCCAGC ATTGGGTCAA CGCGGTCTTA ATATTATGGA ATTCTGTAAG GCGTTCAATG CTCAAACTCA GAGCATGGAG CCAGGCCTTC CCATTCCAGT CGTGATTACA GCGTTTGCTG ATAAGAGCTT CACTTTCATC ATGAAGACTC CTCCAGCGAC CATCATGATT AAGAAAGCTG CGAAGATCGA AAAAGGATCA CCACGTCCTC ATACCGACAA GGTAGGAAAA ATTACACGTG CTCAAGCGGA AGAAATCGCT AAAGCAAAAA TGCCAGATTT GACAGCAGCC GATATGGATG CAGCTGTTAG AACAATCGCT GGTAGCGCCC GTTCCATGGG CATCACAGTG GAAGGTCTCT AA
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Protein sequence | MAKKIIGFIK LQIPAGKANP SPPVGPALGQ RGLNIMEFCK AFNAQTQSME PGLPIPVVIT AFADKSFTFI MKTPPATIMI KKAAKIEKGS PRPHTDKVGK ITRAQAEEIA KAKMPDLTAA DMDAAVRTIA GSARSMGITV EGL
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