Gene Pnuc_0037 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_0037 
Symbol 
ID5053021 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand
Start bp35340 
End bp35693 
Gene Length354 bp 
Protein Length117 aa 
Translation table11 
GC content41% 
IMG OID640470180 
Productcytochrome c, class I 
Protein accessionYP_001154823 
Protein GI145588226 
COG category[C] Energy production and conversion 
COG ID[COG4654] Cytochrome c551/c552 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000534033 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTGCAA GTAGAGCGGG CACAAAAGTA TTTTATTTAT TGGGCCTGCT CTTTTTTTAT 
ACTCAATGCG CGCAAGCCAA TCCTGAAGAT CAAAAAGCAT TTGCGATTGC AAAACAAAAT
GCCTGCTTAG GCTGTCATGC AGTGAATAAA AAGATTGTTG GTCCAAGCTT TCAATCTGTT
GCGCAAAAAT ACAAAAATGA TCCTAATGCA CAAGTATTTT TGAAAAATAA GATTGCCAAA
GGGGGCGCGG GTTCATGGGG TGTTGTGCCA ATGCCAGCCA ATGCAAAGCT AACTGATACA
GAATTGTCTT TATTGGCGGC TTGGGTATTG CGTGGAGCGC CAAGCGAAAA TTAA
 
Protein sequence
MIASRAGTKV FYLLGLLFFY TQCAQANPED QKAFAIAKQN ACLGCHAVNK KIVGPSFQSV 
AQKYKNDPNA QVFLKNKIAK GGAGSWGVVP MPANAKLTDT ELSLLAAWVL RGAPSEN