Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnuc_0035 |
Symbol | |
ID | 5052930 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
Kingdom | Bacteria |
Replicon accession | NC_009379 |
Strand | + |
Start bp | 34010 |
End bp | 34642 |
Gene Length | 633 bp |
Protein Length | 210 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640470178 |
Product | phosphoheptose isomerase |
Protein accession | YP_001154821 |
Protein GI | 145588224 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0279] Phosphoheptose isomerase |
TIGRFAM ID | [TIGR00441] phosphoheptose isomerase |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.0672429 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGCCCC CTTTGGCGCA TAATATTGCT ATGAATAAAG ACACGATTGA ACGCTTGCGC AAGCGCGCAT CTCAACATTT TTTAGACAGC ATTGCGGTAA AGCAAGAAGC AGAAAAGGTG TTGCCTGAAT CAGTGGCCCA TGGGGTTCTT GCGATGGTCG ATTGCTTGCG CTCTGGCGGC AAGATCATGG CTTGTGGAAA TGGCGGATCT GCAGCAGATG CACAGCACTT TGCAGCAGAG TTAATTGGTC GATTCGAAAG AGAACGACAA GAATTAGCAG CGATTGCCTT AACTACGGAT ACCTCAATTC TGACTGCTGT AGGAAATGAC TATAGCTATG ATGAAATCTT TAGCAAACAA GTGCGTGGTC TTGGAAAAAA AGGCGACATT CTCTTAGGCA TTTCTACATC AGGCAATTCT AAGAACGTCG TTAAAGCAAT TGAAGCTGCT AAAACTATGG GCATCAAAAT TATTGCGCTG ACTGGTAATG GTGGGGGCAA GATTGCTACG CTGTTAGATC AGGACGATAT CAATCTCTGC GCGCCTTCAA CTCGCACTGC CCGCATTCAA GAAACCCATT TAGTTTTACT TCATGGCCTA TGTGATGGCG TTGATCACAT CTTGCTCGAC TAA
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Protein sequence | MKPPLAHNIA MNKDTIERLR KRASQHFLDS IAVKQEAEKV LPESVAHGVL AMVDCLRSGG KIMACGNGGS AADAQHFAAE LIGRFERERQ ELAAIALTTD TSILTAVGND YSYDEIFSKQ VRGLGKKGDI LLGISTSGNS KNVVKAIEAA KTMGIKIIAL TGNGGGKIAT LLDQDDINLC APSTRTARIQ ETHLVLLHGL CDGVDHILLD
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