Gene Pnuc_0031 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_0031 
Symbol 
ID5052764 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand
Start bp30204 
End bp30848 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content46% 
IMG OID640470173 
Productbeta-lactamase domain-containing protein 
Protein accessionYP_001154817 
Protein GI145588220 
COG category[R] General function prediction only 
COG ID[COG0491] Zn-dependent hydrolases, including glyoxylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.789051 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCAATCA AATTAGGAAT TGTTCCTGTA ACCCCATATG AACAAAATTG TTCAATTCTA 
GTTTGCCAAG AAACCGGTGA CGCTGCTGTG ATTGATCCAG GCGGTGATAT AGAAAAAATT
TTAGATGGCG TAAAGCAGAT GGGCGGGCAG GTAAAAAAGA TCTTGCTTAC CCATGGCCAT
TTAGACCATT GTGCCGCCGC AAAGGATTTA GCTGATCAGC TTGCCGTGCC GATTGAAGGC
CCTCAGGAGG AAGAGCGTTT TTGGATTGAT CAATTGCCAG AGCAAACTGT ACGTTTTGGT
TTTGGGCACG CTAAAGTCTT TGAGCCTAAT CGTTGGTTGA ATGATGGTGA TCATGTCAAA
GTGGGTAATG TTGACTTAGA GGTATTTCAT TGTCCTGGAC ATACACCAGG CCATATTGTT
TTCTTCGACA GGGCAGATCG ATTAGCAATT GTTGGCGATG TTTTATTTGC CGGCTCAATT
GGCAGAACAG ATTTTCCGCG AGGCAACCAT GCAGATTTAA TTCATGCCAT CAGAACGAAG
TTGTGGCCGC TTGGAGATGA CGTGCAATTT GTTCCGGGGC ATGGGCCAAT GTCTAATTTT
GGCCAAGAGC GCAAAACAAA CCCCTACGTT GGGGATGGCG CTTGA
 
Protein sequence
MPIKLGIVPV TPYEQNCSIL VCQETGDAAV IDPGGDIEKI LDGVKQMGGQ VKKILLTHGH 
LDHCAAAKDL ADQLAVPIEG PQEEERFWID QLPEQTVRFG FGHAKVFEPN RWLNDGDHVK
VGNVDLEVFH CPGHTPGHIV FFDRADRLAI VGDVLFAGSI GRTDFPRGNH ADLIHAIRTK
LWPLGDDVQF VPGHGPMSNF GQERKTNPYV GDGA