Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnuc_0031 |
Symbol | |
ID | 5052764 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
Kingdom | Bacteria |
Replicon accession | NC_009379 |
Strand | + |
Start bp | 30204 |
End bp | 30848 |
Gene Length | 645 bp |
Protein Length | 214 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640470173 |
Product | beta-lactamase domain-containing protein |
Protein accession | YP_001154817 |
Protein GI | 145588220 |
COG category | [R] General function prediction only |
COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.789051 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCAATCA AATTAGGAAT TGTTCCTGTA ACCCCATATG AACAAAATTG TTCAATTCTA GTTTGCCAAG AAACCGGTGA CGCTGCTGTG ATTGATCCAG GCGGTGATAT AGAAAAAATT TTAGATGGCG TAAAGCAGAT GGGCGGGCAG GTAAAAAAGA TCTTGCTTAC CCATGGCCAT TTAGACCATT GTGCCGCCGC AAAGGATTTA GCTGATCAGC TTGCCGTGCC GATTGAAGGC CCTCAGGAGG AAGAGCGTTT TTGGATTGAT CAATTGCCAG AGCAAACTGT ACGTTTTGGT TTTGGGCACG CTAAAGTCTT TGAGCCTAAT CGTTGGTTGA ATGATGGTGA TCATGTCAAA GTGGGTAATG TTGACTTAGA GGTATTTCAT TGTCCTGGAC ATACACCAGG CCATATTGTT TTCTTCGACA GGGCAGATCG ATTAGCAATT GTTGGCGATG TTTTATTTGC CGGCTCAATT GGCAGAACAG ATTTTCCGCG AGGCAACCAT GCAGATTTAA TTCATGCCAT CAGAACGAAG TTGTGGCCGC TTGGAGATGA CGTGCAATTT GTTCCGGGGC ATGGGCCAAT GTCTAATTTT GGCCAAGAGC GCAAAACAAA CCCCTACGTT GGGGATGGCG CTTGA
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Protein sequence | MPIKLGIVPV TPYEQNCSIL VCQETGDAAV IDPGGDIEKI LDGVKQMGGQ VKKILLTHGH LDHCAAAKDL ADQLAVPIEG PQEEERFWID QLPEQTVRFG FGHAKVFEPN RWLNDGDHVK VGNVDLEVFH CPGHTPGHIV FFDRADRLAI VGDVLFAGSI GRTDFPRGNH ADLIHAIRTK LWPLGDDVQF VPGHGPMSNF GQERKTNPYV GDGA
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