Gene Pnuc_0030 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_0030 
Symbol 
ID5052761 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand- 
Start bp29729 
End bp30142 
Gene Length414 bp 
Protein Length137 aa 
Translation table11 
GC content45% 
IMG OID640470172 
Productglycine cleavage system H protein 
Protein accessionYP_001154816 
Protein GI145588219 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0509] Glycine cleavage system H protein (lipoate-binding) 
TIGRFAM ID[TIGR00527] glycine cleavage system H protein 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTCGCAA AGGATAAAAT AATGAATAGC CAAGATACTT TTAAATTTGC AGAAACTCAC 
GAGTGGGCCG ATCTTGAAAA CGATGGCTTG GTCTGGGTTG GAATCAGCAA TCATGCGCAA 
GAGGCCCTTG GCGATGTCAT GTTTTTTCAA GCACCAAAGA TTGGTCAGCA AGTAAAACAG 
GGCGAAGCGA TTGCAGTCAT TGAATCCGTT AAGGCTGCCA GCGATATTCA TACTCCGATC 
ACGGGAGAAA TTGTGGAGCT AAACGAAGAA GTCGATGCCA CACCGGAACT GGTTAATCAG 
AATCCCTATG GAGTTTGGCT TTTCAAAATT AAGCCATCAT CAGAAGACGC TCTCAATTCC 
GAACTGGGCA CACTTTTGAG TCTAGAGCAG TACACCTCTA GCTCGGGCGC TTAA
 
Protein sequence
MFAKDKIMNS QDTFKFAETH EWADLENDGL VWVGISNHAQ EALGDVMFFQ APKIGQQVKQ 
GEAIAVIESV KAASDIHTPI TGEIVELNEE VDATPELVNQ NPYGVWLFKI KPSSEDALNS 
ELGTLLSLEQ YTSSSGA