| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_0024 |
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| Symbol | |
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| ID | 5052551 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | + |
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| Start bp | 21873 |
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| End bp | 23414 |
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| Gene Length | 1542 bp |
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| Protein Length | 513 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640470166 |
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| Product | F0F1 ATP synthase subunit alpha |
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| Protein accession | YP_001154810 |
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| Protein GI | 145588213 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0056] F0F1-type ATP synthase, alpha subunit |
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| TIGRFAM ID | [TIGR00962] proton translocating ATP synthase, F1 alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.1189 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAACTCA ACCCTTCCGA GATCAGCGAG CTGATCAAAA GCCGAATTAG CGAAATGGGC
GTTGACTCCC AAGTTCGCAA CGAAGGCACC GTTATTTCAG TGACCGACGG TATTTGCCGC
GTACATGGTT TGTCAGGCGT TATGCAGGGC GAAATGTTGG AGTTTCCTAA CAACACTATC
GGCCTCGCAT TAAACCTTGA GCGTGATTCT GTTGGTGCCG TGGTGTTGGG TGAATACACC
CACATTAAAG AAGGCGACCC AGTCAAATGT ACTGGCCGCA TTTTGGAGGT TCCAGTTGGC
CCAGAGTTGC TCGGTCGCGT TGTAAACGCA CTTGGTCAAC CGATTGATGG CAAAGGCCCA
ATCAACACGA AGTTAACTGA CTTTATTGAA AAAGTTGCTC CTGGCGTTAT CGCACGTCAA
TCTGTTAGCC AGCCAGTGCA AACTGGTTTG AAGGCGATTG ATGCGATGGT TCCAATTGGC
CGCGGTCAGC GTGAGTTAAT CATTGGCGAC CGCCAAACTG GTAAGACAGC TGTTGCGGTT
GACGCGATCA TTAACCAAAA AGGTAAAGGC GTTTATTGCG TTTACGTTGC GATTGGTCAA
AAAGCTTCTA CTATTGCTAA CGTTGTTCGC AAGCTCACAG AATTGGGCGC GATGGAGTAC
ACCGTTGTTG TTGCAGCGAG TGCTTCTGAG TCTGCAGCGA TGCAGTACCT CTCTGCTTAC
GCAGGTTGCA CTATGGGTGA ATACTTCCGC GATCGCGGCG AAGACGCTTT GATTGTTTAC
GATGACTTGA CCAAGCAAGC AGTTGCTTAT CGTCAAATCT CCTTGTTGCT CCGCCGCCCA
CCAGGCCGCG AAGCTTATCC TGGCGACGTG TTCTATCTCC ACTCACGCTT GCTCGAGCGC
GCTGCTCGTG TAAATGCTGA ATATGTTGAG AAGTTCACCA ACGGCGCAGT AAAAGGCAAA
ACTGGTTCTT TGACCGCATT GCCAATTATT GAAACTCAAG CTGGTGATGT TTCTGCATTC
GTTCCCACCA ACGTTATTTC GATTACTGAC GGCCAGATTT TCTTGGAAAC CGACTTGTTT
AACGCTGGCG TACGTCCTGC GATTAACGCC GGTATTTCTG TTTCCCGCGT TGGTGGTGCT
GCACAAACTA AAGTGATTAA GAAATTGTCT GGCGGTATTC GTACCGACTT AGCGCAATAT
CGTGAATTGG CAGCGTTTGC TCAGTTTGCA TCTGACCTTG ACGAAGCAAC CCGCAAGCAG
CTCGAGCGCG GTCGTCGCGT TACTGAATTG TGTAAGCAAG CTCAATACAA GCCACTCCAA
GTTTGGGAAA TGGCTGCTTC ACTTTACGCT GTTAACAACG GCTATTTCGA TGACCTCGAA
GTGAAGAACG TATTGGCCTT CGAAAAAGGT TTGCAAGACC ACTTGAAATC TAAGTACGCT
GACTTAGTTG CGCGTATTGA AGAAACCAAA GACTTGAGCA AAGATGACGA AGCTGCTTTG
CGCGCCGCGA TTGAGGATTA CAAGCGTTCT GCCTCTTTCT AA
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| Protein sequence | MQLNPSEISE LIKSRISEMG VDSQVRNEGT VISVTDGICR VHGLSGVMQG EMLEFPNNTI
GLALNLERDS VGAVVLGEYT HIKEGDPVKC TGRILEVPVG PELLGRVVNA LGQPIDGKGP
INTKLTDFIE KVAPGVIARQ SVSQPVQTGL KAIDAMVPIG RGQRELIIGD RQTGKTAVAV
DAIINQKGKG VYCVYVAIGQ KASTIANVVR KLTELGAMEY TVVVAASASE SAAMQYLSAY
AGCTMGEYFR DRGEDALIVY DDLTKQAVAY RQISLLLRRP PGREAYPGDV FYLHSRLLER
AARVNAEYVE KFTNGAVKGK TGSLTALPII ETQAGDVSAF VPTNVISITD GQIFLETDLF
NAGVRPAINA GISVSRVGGA AQTKVIKKLS GGIRTDLAQY RELAAFAQFA SDLDEATRKQ
LERGRRVTEL CKQAQYKPLQ VWEMAASLYA VNNGYFDDLE VKNVLAFEKG LQDHLKSKYA
DLVARIEETK DLSKDDEAAL RAAIEDYKRS ASF
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