Gene Pnuc_0019 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_0019 
Symbol 
ID5052397 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand+ 
Start bp19034 
End bp19528 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content43% 
IMG OID640470161 
Productputative ATP synthase protein I AtpI 
Protein accessionYP_001154805 
Protein GI145588208 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.00588549 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGATTCCTC AAAAAAATCG ATTTTCTGAT GTAGATGACT GGGATGAGCC CGAAGAAGAG 
GTGTATCGGG TCTATAGCAA AGAAGAAATT GCTGCGCTGC AAAAAAGCGA TGCTAGCAAG 
TACCGCGCCC TATCTCCTTG GAAAATAGTT TTGGCTCAAA TAGTGATTAC AGCGCTTAGC 
ATGGTGTTTT GGTCAATTTT TGGGGCGCCG GTAGGGGTAA GCCTTTATAC TCAGTCGGCC 
TTTTTAGGTG GTTTAATTAG CGTCTTGCCT ACAGCCTTGT TTTTAACGAG GTTGGAGTTG 
GCAAAAAAAT CGCAAAGATT AAATCCAGGA AGATTTTTGG CAGCATTAGT ATCTGGCGAA 
TTTATAAAAA TCGCCGTGAC ATTAATGATG TTTATTGGGA TTGCTTTTTT AGTCCCTGGC 
GTGCTGTGGG TCCCATTGCT GGTGACTTAT TTGCTAGCCT TGAAATGTGT ATGGCTAGCG 
TGGTTTTGGC GCTAA
 
Protein sequence
MIPQKNRFSD VDDWDEPEEE VYRVYSKEEI AALQKSDASK YRALSPWKIV LAQIVITALS 
MVFWSIFGAP VGVSLYTQSA FLGGLISVLP TALFLTRLEL AKKSQRLNPG RFLAALVSGE 
FIKIAVTLMM FIGIAFLVPG VLWVPLLVTY LLALKCVWLA WFWR