| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_0013 |
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| Symbol | |
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| ID | 5052181 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | - |
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| Start bp | 12512 |
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| End bp | 13759 |
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| Gene Length | 1248 bp |
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| Protein Length | 415 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640470155 |
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| Product | acyl-CoA dehydrogenase domain-containing protein |
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| Protein accession | YP_001154799 |
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| Protein GI | 145588202 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCCTTATT CAAAGATTAT TTTAGCGAAA GGAATTTATA AATGTCATTT CACATTTAGC
TACTATTACA ATCAAATCAT GGATTTCTCC TTAACGCCCA AACTAGAAGC GCTGCGGGAT
CGTACGCGAG CATTCATTCT CGAACAAGTT ATTCCGCTCG AAAAAGATCC ACGACAAAAT
GAGCATGGAC CATCCGAAGA GTTGCGCAAA GATCTCATCG AGCTTGCCCG TAAAGAGGGC
CTACTAACAC CACACGCTTC AATTGAGATG GGCGGCCTAG GATTAAGCCA CGTAGAGAAA
GCAGTAATCT TTGAAGAGGC TGGCTACTCC TGTTTGGGTC CAATAGCCAT GAATATTCAC
GCACCCGATG AGGGGAATAT TCATTTGATG GAAGAGGTTG CTACTCCTGA GCAGAAAGAG
CGTTGGCTAA AGCCACTAGC TCAGGGAAAA ATTCGTTCTT GCTTTGCAAT GACAGAACCA
GCCCCCGGAG CAGGTTCAGA CCCCTCCATG CTGGCAACTA CCGCAATCAA AGACGGTGAC
GACTATCTCA TCAATGGACG CAAGTGGTTT ATCACTGGGG CCGAAGGGGC AGATTTCGTA
ATTATCATGG CGCTCGGTGA AGACGGCACT GCCACTATGT TTCTCTCTGA TATGAATGTG
CCTGGAATAG AGCTTGTTCG CAATATGGAC GCAATGGACA GTTGCTTTAC TGGCGGACAT
GGAGTTTTGC AGTTTACGAA TTTGCGCGTT CCAGCTAAAA ATATCTTAGG TGAGTTTGGT
AAAGGATTTA AATATGCTCA GGTGCGTTTG GCGCCAGCCC GACTGACACA CTGCATGCGC
TGGCTTGGGC AAGCGCGCCG AGCTCAAGAT ATAGCAATTG CCTACGCACA ACAAAGAGAA
GCTTTTGGGA AAATTTTAGG CGCACATGAA GGCGTAGGCT TCATGTTGGC AGATAACGAT
ATGGATCTAC AAACATCCAG ACTACATATA TTGCAAACTG CTTGGCTGTT AGACCAAGGC
CAGCGCTGCA ATTATGAATC GAGTCGTGCC AAGGTTGTTT GTTCTGAAGC TGAGTGGCGC
GTAGTAGATC GCTGTGTACA AATTTTAGGT GGCCAGGGTG TTACCGGTGA AACAGCGTTG
ATGAAAATAT TCAAAGATAT GCGGGGCTTC CGCATCTATG ATGGCCCAAG CGAAGTACAT
CGCTGGAGTA TGGCTCGCAA ACTTATTGGA AACAAAGAAT CTAAGTGA
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| Protein sequence | MPYSKIILAK GIYKCHFTFS YYYNQIMDFS LTPKLEALRD RTRAFILEQV IPLEKDPRQN
EHGPSEELRK DLIELARKEG LLTPHASIEM GGLGLSHVEK AVIFEEAGYS CLGPIAMNIH
APDEGNIHLM EEVATPEQKE RWLKPLAQGK IRSCFAMTEP APGAGSDPSM LATTAIKDGD
DYLINGRKWF ITGAEGADFV IIMALGEDGT ATMFLSDMNV PGIELVRNMD AMDSCFTGGH
GVLQFTNLRV PAKNILGEFG KGFKYAQVRL APARLTHCMR WLGQARRAQD IAIAYAQQRE
AFGKILGAHE GVGFMLADND MDLQTSRLHI LQTAWLLDQG QRCNYESSRA KVVCSEAEWR
VVDRCVQILG GQGVTGETAL MKIFKDMRGF RIYDGPSEVH RWSMARKLIG NKESK
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