| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_0006 |
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| Symbol | |
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| ID | 5053041 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | + |
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| Start bp | 6181 |
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| End bp | 6942 |
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| Gene Length | 762 bp |
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| Protein Length | 253 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640470148 |
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| Product | ABC transporter related |
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| Protein accession | YP_001154792 |
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| Protein GI | 145588195 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0411] ABC-type branched-chain amino acid transport systems, ATPase component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.362312 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCAAGAAA TAATATTAGA GACAATTGGG TTGGGAAAAT CCTTTAAAGG GTTTTCTGCA
GTTACGGACG TGAACCTCAA GGTCACTCGC GGTACCATTC ACGCCCTAAT TGGTCCCAAT
GGCGCAGGAA AAACAACATG CTTCAACTTG CTTACTAAGT TCTTGGAGCC AACCAGTGGC
CAAATCTTAT TTAATGGTTT TGACATTACA AAAGAAGCGC CAGCCGAAAT AGCCCGCCGT
GGAATTATTC GCTCTTTTCA GATTTCAGCT GTTTTCCCAC ACTTAACAGT TTTAGAGAAT
GTTCGTGTTG CACTGCAGCG AGGATTGGGA ACAGAGTTCT TTTTTTGGAA ATCCGGCTCT
TCTTTAAATG TTTTGAATGA CCGCGCTTTA GAGTTGTTGC ATGAGGTTGG TTTGGAGGAG
TTTGCCCATA AAGAAACCCT CAACTTAGCT TATGGACGCA AAAGGGCCCT TGAAATTGCA
ACTACCTTGG CCATGGAGCC AGAGTTGATG CTCTTAGATG AGCCTACCCA AGGTATGGGA
CATGAGGACG TTGACCACGT TACACGGTTA ATCGATCGCG TTGCCAAGGG GAGAACTATC
CTCATGGTTG AACACAATAT GAAGGTGATT GCTTCTATCG CCAATAAAAT TACAGTTTTA
CAGCGAGGAT CTGTCTTGGC TGAAGGCTCG TACCAAGAGG TGTCTAGCAA TCCTTTGGTG
GTTGAGGCAT ATATGGGCAG CCACGGGGGT GATGCCCTAT GA
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| Protein sequence | MQEIILETIG LGKSFKGFSA VTDVNLKVTR GTIHALIGPN GAGKTTCFNL LTKFLEPTSG
QILFNGFDIT KEAPAEIARR GIIRSFQISA VFPHLTVLEN VRVALQRGLG TEFFFWKSGS
SLNVLNDRAL ELLHEVGLEE FAHKETLNLA YGRKRALEIA TTLAMEPELM LLDEPTQGMG
HEDVDHVTRL IDRVAKGRTI LMVEHNMKVI ASIANKITVL QRGSVLAEGS YQEVSSNPLV
VEAYMGSHGG DAL
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