| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_0002 |
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| Symbol | |
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| ID | 5052757 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | + |
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| Start bp | 1724 |
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| End bp | 2839 |
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| Gene Length | 1116 bp |
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| Protein Length | 371 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 640470144 |
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| Product | DNA polymerase III subunit beta |
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| Protein accession | YP_001154788 |
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| Protein GI | 145588191 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0592] DNA polymerase sliding clamp subunit (PCNA homolog) |
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| TIGRFAM ID | [TIGR00663] DNA polymerase III, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.757969 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAACTTG TTAACACCTC GCGCGATAGC TTATTAAAAC CACTACAGGT GGTGAGTGGC
ATTGTTGAGC GTAGACACAC ACTTCCTATT TTGGCCAACT TATTGTTTAA GAAGAATGGT
GAGAAGGTTT CTTTTATCTC TACGGATATT GAAATTCAAA TTACAACCAA TGCAAATTTT
GGCGTTGGTT CTGAGGATGT CACAACTACC GTTGCTGCCA GAAAATTATT AGACATTTTG
CGAGCGCTTC CAGAAGGTGA AGTTTCTTTA AATTTAAAAG ACAACCGTAT GGTTGTGCAA
AGCGGAAAAA GCCGGTTCTC ACTTCAAACC TTATCCGCAA CAGAGTTTCC GGTAATGCAA
AGCGTTGGTG AGGTAACTGC TGCATGGAGC ATGACGCAAA AAAGTTTTCG TCAATTAATT
AGCCAAGTTC ATTTCTCAAT GGCTCAGCAG GATATTCGCT ATTACCTCAA CGGTATGTTG
TTGGTAGTGG AGGGTAAAGA GGTTGTAGCT GTTGCTACCG ACGGTCATCG TTTAGCTTTT
TCCCGGGTTG AGTTAACCGA GGCACCATCT GGATCGGGCC AGCGGCAGGA AATTATTATT
CCTAGAAAAA CAATTTTAGA GTGCCAACAT TTATTAGAAG ATTCTGATGA GTCTCTTGAA
ATTAGCTTGA CTGCAAATCA AGTGAAGTTT TCCTTTGGTG ACATTGAGTT GATTTCAAAA
CTGGTTGAAG GTAAGTTCCC TGATTTTCAA CGCGTTATTC CAAAGGGCCA CAAAAATACC
TTAGTGGTAG GTCGTGATGC ATTACAAGCA GCTTTGCAAC GAGCCGCTAT CTTGACTACT
GATAAATTTA AAGGGGTGCG CTTCTCCTTA TCCCCTAACC GAATCACTAT TCAATCTACT
AATGCTGAGC AAGAAGAAGC TCAGGAAGAG ATTGAAACTG AATATAGCGG CGACGCAGTT
GAGATTGGTT TTAATGTCAG TTATTTATTG GATGTTTTAT CAAACCTCAA AAATGAAAAA
ATTCAAATAA GTCTAGGTGA CGCAAACAGT AGTGCGGTTG TGACCTTACC TGGATCAGAA
AATTTTAAGT ATGTAGTGAT GCCAATGCGC ATTTAA
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| Protein sequence | MQLVNTSRDS LLKPLQVVSG IVERRHTLPI LANLLFKKNG EKVSFISTDI EIQITTNANF
GVGSEDVTTT VAARKLLDIL RALPEGEVSL NLKDNRMVVQ SGKSRFSLQT LSATEFPVMQ
SVGEVTAAWS MTQKSFRQLI SQVHFSMAQQ DIRYYLNGML LVVEGKEVVA VATDGHRLAF
SRVELTEAPS GSGQRQEIII PRKTILECQH LLEDSDESLE ISLTANQVKF SFGDIELISK
LVEGKFPDFQ RVIPKGHKNT LVVGRDALQA ALQRAAILTT DKFKGVRFSL SPNRITIQST
NAEQEEAQEE IETEYSGDAV EIGFNVSYLL DVLSNLKNEK IQISLGDANS SAVVTLPGSE
NFKYVVMPMR I
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