| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pars_2329 |
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| Symbol | rpl13p |
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| ID | 5054173 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum arsenaticum DSM 13514 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009376 |
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| Strand | + |
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| Start bp | 2084627 |
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| End bp | 2085187 |
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| Gene Length | 561 bp |
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| Protein Length | 186 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640469881 |
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| Product | 50S ribosomal protein L13P |
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| Protein accession | YP_001154525 |
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| Protein GI | 145592523 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0102] Ribosomal protein L13 |
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| TIGRFAM ID | [TIGR01077] ribosomal protein L13, archaeal/eukaryotic |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000000142062 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0000169503 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGATAGAGA AGAGGGTTTT AGAATTTTCG CAACTTCCCG ACACCGGCGA GGTTGTAATA
GACGCGGCGG GCCATATTGC AGGTAGGTTG GCCACATATA TAGCGAAGAT TTTGGTGGAG
AGGCCTGGCG TGAGAGTAGT GGTGATAAAC GCGGAAAAGC TCGCAGTCAC CGGGGATGAG
AAGATGGTCG TAGAGTGGTT TAAGAAAAAA ATAAGTGAGT GGCGTACGCA TTACAACCCA
GAAAAGGTTG GGCCCAAAGT GCCGAGGAGG CCGGATCGGG TGTTTAAGCG TATTGTTAGA
GGTATGTTGC CGAAGAAGAG CTGGACAGGG CGATATGCGC TAAAGAGGCT GAGGGTCTAT
ATGTCGGTGC CTATTGATAT GCTGAATAGG AAAAAGCTGG TGGTATACGA GGTGCCGCAG
GCCAAGCTGA GGATTAGGCC GTTGCTGAAA TACACAACTT TGGAAGAGGT TTGGCGAGCA
ATTGATCCTA AGGCGTGGGA GAAGTGGAAG AGGGCAAACG AGGTTTGGGG CAAAAAATTA
AAACAGGCCA CTAGCGGATA G
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| Protein sequence | MIEKRVLEFS QLPDTGEVVI DAAGHIAGRL ATYIAKILVE RPGVRVVVIN AEKLAVTGDE
KMVVEWFKKK ISEWRTHYNP EKVGPKVPRR PDRVFKRIVR GMLPKKSWTG RYALKRLRVY
MSVPIDMLNR KKLVVYEVPQ AKLRIRPLLK YTTLEEVWRA IDPKAWEKWK RANEVWGKKL
KQATSG
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