Gene Pars_2324 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_2324 
Symbol 
ID5056337 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp2081831 
End bp2082145 
Gene Length315 bp 
Protein Length104 aa 
Translation table11 
GC content50% 
IMG OID640469876 
Product50S ribosomal protein L30e 
Protein accessionYP_001154520 
Protein GI145592518 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1911] Ribosomal protein L30E 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00112363 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000131397 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
GTGGCCCTCG TGATTGATAT AGGCAGAGAG CTCCAAGTAG CGATCAACAC GGGAAGCGTG 
GTTATAGGCT TCGAAGAAAC GAGAAGAGCA TTGTTGGCGG GTACGCCTAA GTTGGTAATT
ATAGCGGCAA ACGCGCCTAA GTGGGCAAAA GACGATATTG AATACTACGC CAAACTAGCC
GGCATTCCGA TATTTGTTTT TCCCGGCTCG AGCATAGAGC TGGGCGCTGC GGCTAAGAGG
CCGCATAAAA TAATGGCACT GGCAGTGATC GACCCTGGCC AAAGCGAGAT TTTGAAATTA
ACAGAACATG CCTGA
 
Protein sequence
MALVIDIGRE LQVAINTGSV VIGFEETRRA LLAGTPKLVI IAANAPKWAK DDIEYYAKLA 
GIPIFVFPGS SIELGAAAKR PHKIMALAVI DPGQSEILKL TEHA