Gene Pars_2298 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_2298 
Symbol 
ID5054090 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp2057319 
End bp2057675 
Gene Length357 bp 
Protein Length118 aa 
Translation table11 
GC content55% 
IMG OID640469850 
Producttranscriptional regulator, TrmB 
Protein accessionYP_001154494 
Protein GI145592492 
COG category[S] Function unknown 
COG ID[COG2512] Uncharacterized membrane-associated protein/domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.00618378 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCTAGGGT TGGTGCTTCT AATAGTCCAG CTGTCTGTGT TAGTGGCGGC GGCCTACGCT 
GGGAGGACAA AGCTGAAAAG ACTATTGGCT GAGGCCCAGA CCACCGGCGA GACTGAGCTA
GATGAGCCGC TGGAGGGAGA TATGTCCGAG GTGGACAGGT CGATACTGAG GCTACTCGCC
GAGCGGCAGG GGGTTATGTA CCAAAGCGAG ATCGTAAAAG AGCTGGGCCT ACCCAAGAGC
ACCGTCCATA AAGCGCTGAG GAGGCTCAGC GAGGGTGGCT TCGTGGAGAT TCAGAAACGG
GGCCGCTTAA ACGTGGTTAT CTTGAAAAGA GCTACTTCAG AGGCCTCAGC AACTTAA
 
Protein sequence
MLGLVLLIVQ LSVLVAAAYA GRTKLKRLLA EAQTTGETEL DEPLEGDMSE VDRSILRLLA 
ERQGVMYQSE IVKELGLPKS TVHKALRRLS EGGFVEIQKR GRLNVVILKR ATSEASAT